Gene Franean1_4460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4460 
Symbol 
ID5672811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5328032 
End bp5328838 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content58% 
IMG OID641243328 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001508744 
Protein GI158316236 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAATCGG ACAGCTCCAA TATTGACATG GCGGTGTCGG TATATAATTC AGCTATGTGG 
GGTCGCGAGG CGGGGAATGG GGCTCATTTG GGGGGGCAAT TGGCTACCTA TCGAACATCA
AGACCTTCTC TGCGCAGAAA TGGGCCCGCG CTGATCCTCG ACCTCGGCGC CGACGGGAAC
CCGTTAGACA CGGACACTCT CTCTCAGTTG AATTTGTTGC TGGACGAGAT AGAGCAGACG
CCGTCGCCAT GCTTCCTCGT CACCATCGGC TCAGGGGGAC ATTGGTGTAT TGGCGTGAAT
GTCGCCTGGG TGTTCAAGGT AGACGAAGAT GAGATCGCTT CCTTTGTCGT CGAGGTCCAT
CGGCTCTACG CGAGGTTTCT GACGCTGCCG ATGGTGTCCA TCGCCGCAAT TCAGGGAAAC
GCTGTCGCCA GCGGCCTTAT GCTTGCGTTG TCACATGACT TCCGCGTTAT GCGGCCGGGG
CAGGGTTTCC TGTCTCTTCT CAACGTGGAT CTTGGCTATC CCCTTGCCGT TGAGGACACG
CTTCTGCTAC GCGCCAAGCT TCCGCACCCC ACGATCATGG AGATGGTCGC CACAGGAAAG
CGCTACGATG CGGCCACCGC TAAGGCGGCC GGTCTCGTCG ACATTGTGAC TTCCGGTGAA
ACTGTCCTCG ACGCGGCCAC CGCGTTTGGA CTGCCTCTTG CTCGCAAGAA TAGAAACGTG
ATCGAAAACT TCAAGAAAGT GCTTTTCGAC GAGGTTCTCC GTGCCCCGTC CGGCCCGTGG
CCAGGGGCCT ACAGTCGTCT CCCGTAG
 
Protein sequence
MESDSSNIDM AVSVYNSAMW GREAGNGAHL GGQLATYRTS RPSLRRNGPA LILDLGADGN 
PLDTDTLSQL NLLLDEIEQT PSPCFLVTIG SGGHWCIGVN VAWVFKVDED EIASFVVEVH
RLYARFLTLP MVSIAAIQGN AVASGLMLAL SHDFRVMRPG QGFLSLLNVD LGYPLAVEDT
LLLRAKLPHP TIMEMVATGK RYDAATAKAA GLVDIVTSGE TVLDAATAFG LPLARKNRNV
IENFKKVLFD EVLRAPSGPW PGAYSRLP