| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4377 |
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| Symbol | |
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| ID | 5672730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5223940 |
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| End bp | 5224899 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641243246 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_001508663 |
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| Protein GI | 158316155 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACC GTCAGCAGCC AAGCCGGATG CCGACGTACG AGGGGCGTGC ACTGGCCCGT
CCTGAGGAGG AGATCGTCGA TCAGGGGCTG GGCTTCGACA TGGGCACGGT GGTGAGCCGG
CGGCGGATGC TGGCCTTCTT CGGTGTGGGT GCCGCGGCAG CAAGCCTAGC CGCCTGCACT
CCAGGCCAGG TCGGGTCCTC GGGGGCGTCC GCTGCTACGG CGTCCGCGGT TGCAGGGGAG
ATCCCCGAAG AGACCGCGGG CCCCTACCCG GGCGACGGGT CCAACGGGCC GGACGTCCTC
GAGCAGAGCG GTGTGGTCCG CAGTGACATC CGGTCCAGCT TCGGCGACTC GACCGGCACC
GCCGAAGGCG TCCCCATGAC ACTGGCGCTG ACGGTCCGCG ACCTCGCGAA CGGTGGCACG
CCCTTCGCCG GGGTGGCCGT GTACGTGTGG CACTGCGACC GCGAGGGCCG CTACTCGCTG
TACTCCGACG GCGTCACCGA CCAGAACTAT CTGCGTGGCG TCCAGATCAC CGACACCGCC
GGCACGGTCC GTTTCACCAG CATCTTCCCC GCCTGCTACT CAGGACGCTG GCCCCACATC
CACTTCGAGG TCTACCCCGA CCAGGGCAGC ATCACCGACG CCACCACGGC CATCGCCACC
TCCCAGGTCG CACTCCCCCA AGACGTCTGC ACCACGGTCT ACGCCCAGCA GGGCTACGAG
GCGTCCGTGA GCAACCTGGC CCAGGTCAGC CTCTCCAGCG ACAACGTCTT CGGCGACGAC
TCCGGCGCCA GCCAACTCGC CACCGTGACT GGCGACGTCA CCGGCGGCTA CACCGTCTCC
CTTCCTGTCA GCGTCGACAC CGCCACCACC CCCGGCGGCG GCGGCCAAGC CCCCGGAGGG
GGCGGCGGCC AGCCGCCGTC CGGCGGGCCA GGTGGTCAGC CGCCGGCCAC ATCGAGCTGA
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| Protein sequence | MADRQQPSRM PTYEGRALAR PEEEIVDQGL GFDMGTVVSR RRMLAFFGVG AAAASLAACT
PGQVGSSGAS AATASAVAGE IPEETAGPYP GDGSNGPDVL EQSGVVRSDI RSSFGDSTGT
AEGVPMTLAL TVRDLANGGT PFAGVAVYVW HCDREGRYSL YSDGVTDQNY LRGVQITDTA
GTVRFTSIFP ACYSGRWPHI HFEVYPDQGS ITDATTAIAT SQVALPQDVC TTVYAQQGYE
ASVSNLAQVS LSSDNVFGDD SGASQLATVT GDVTGGYTVS LPVSVDTATT PGGGGQAPGG
GGGQPPSGGP GGQPPATSS
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