| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4333 |
|---|
| Symbol | |
|---|
| ID | 5672688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 5176408 |
|---|
| End bp | 5177439 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641243206 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001508623 |
|---|
| Protein GI | 158316115 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0375931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCGG CCAGGGTGCC GGGACCGGTG GCGCCACCGG TCGTGATCGG GCTGGCGGCC
GGGGCCGTCG TGCTGCTGAT CTGGGCGGCC GTCGGCGGTG GTTACTTCTG GCCGCGCTGG
GTGTGGTTCG GCATCGGCAC CGTGTTCTGG GCCGCGATCC TCGTCGGGTG GGTCCGGCGG
ATACCGCCGG GGCGGCGCCG GTGGCTCGCC GCCACCCGGG CGGTGGCTGC CCTGGCCATC
CCGGTCGACG TGGTGGTGTG GGCGCTGTCC GGCGGCGGCT ACTTCTGGCC GGTCTGGACG
ATTCTCGCGC TCACGATCGG GCTCGCCATC CACACCTGGA TCGTCGCGCT GATGCCCGCC
GAGCGGGAGC GTGAGCTCAC CGAGCGGGTC GACGCGCTCA CCCGCACCCG CCGCGGCGCG
CTCGACGGGC AGGCCGCCGA GCTCAAGCGG ATCGAGCGGG ACCTGCACGA CGGCGCCCAG
GCGCGGATCG TCTCGCTGGC GATGAACCTC GGCATGGCCG AGGCCCTGCT GCACAGCGAC
CCGGCGGCGG CGGCGAAGCT GCTCAGCGAC GCCCGGCTGT CCGCGGTCGG CGCGCTCGAC
GACCTGCGGG CCGTCATGCA CAGCATCCAC CCCTCGGTGC TCGCCGACCG GGGGCTCGCC
GGGGGCATCC GCGCGCTCGC GCTCGACCTG TCCCTGCCGG TCCGCGTCGA CGGCGACGTC
CCGTCCGGGC TGCCGGCGGC GGTCGAGTCG GCCGTCTACT TCGCGACCGC GGAATGCCTG
GCCAACGTCG TCAAGCACAG CCGGGCCGCG CACGGCACGG TGCGGTTCGC GCACGACGGC
AGGATGCTGA GCGTGGTCGT CACGGACGAC GGGCTCGGCG GGGCGGATCC CGCGTTCGGC
CAGGGCCTGC GCGGGGTGGT GCGCCGGCTC GAGGCGTTCG ACGGCCGGAT GTCGGTACAC
AGCCCGTCCG GGGGACCGAC GAGGATCACG ATCACCCTGC CGTGCCCGGT CCTGCCGGGC
GCGGAGGCCT GA
|
|---|
| Protein sequence | MASARVPGPV APPVVIGLAA GAVVLLIWAA VGGGYFWPRW VWFGIGTVFW AAILVGWVRR
IPPGRRRWLA ATRAVAALAI PVDVVVWALS GGGYFWPVWT ILALTIGLAI HTWIVALMPA
ERERELTERV DALTRTRRGA LDGQAAELKR IERDLHDGAQ ARIVSLAMNL GMAEALLHSD
PAAAAKLLSD ARLSAVGALD DLRAVMHSIH PSVLADRGLA GGIRALALDL SLPVRVDGDV
PSGLPAAVES AVYFATAECL ANVVKHSRAA HGTVRFAHDG RMLSVVVTDD GLGGADPAFG
QGLRGVVRRL EAFDGRMSVH SPSGGPTRIT ITLPCPVLPG AEA
|
|---|
| |