| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4332 |
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| Symbol | |
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| ID | 5672687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5175667 |
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| End bp | 5176344 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641243205 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001508622 |
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| Protein GI | 158316114 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00650273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGAGG AACCCGCCGA CCCCGCGCGG CCGCTGCGGG TCGTGCTCGC CGAGGATCTC
GCCCTGCTGC GGGACGGGCT CATCCGGCTG CTCGAGGCGC ACGGCTTCGA GATCGTCGCC
GCGGTCGACA ACGCCCCGCA GCTGGTGCGC GAGCTCGTCA CGCTGCGTCC GGACGTCGCC
GTCGTCGACG TCCGACTGCC GCCGAGCCAC ACCGACGAGG GCCTGCGCGC CGCGCTCGAG
GCGCGGGAGC GCATCCCCGG GCTGCCGGTG CTCGTGCTCT CGCAGTACGT CGAGCAGCTC
TACGCCCGTG AGCTGCTCGC CGACGGCCGG GGCGGCATCG GCTACCTCCT GAAGGACCGG
GTCTCCGACG TGGGCCAGTT CGTCGACGCC GTCCGGCGGG TCGCCGCCGG CGGGACGGCC
CTCGACCCCA CGGTGGTCGC CCGCCTGCTC GACAGCCGCC GCCGTCGCCT GCCGCTGGAC
CGCCTCAGCC CGCGCGAGCG TGAGGTCCTC TCGCACATGG CGCAGGGCCG GTCCAACGCG
GCGATCGGTG CCGCGATGGT GATCACCGAG AAGGCCGTCG GCAAGCACAC CAACAGCATC
TTCACCAAGC TGGGGCTGAT GCCGTCCGAG GACGACAACC GGCGGGTGCT CGCCGTCCTC
GCCTACCTCG AGGGCTGA
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| Protein sequence | MPEEPADPAR PLRVVLAEDL ALLRDGLIRL LEAHGFEIVA AVDNAPQLVR ELVTLRPDVA
VVDVRLPPSH TDEGLRAALE ARERIPGLPV LVLSQYVEQL YARELLADGR GGIGYLLKDR
VSDVGQFVDA VRRVAAGGTA LDPTVVARLL DSRRRRLPLD RLSPREREVL SHMAQGRSNA
AIGAAMVITE KAVGKHTNSI FTKLGLMPSE DDNRRVLAVL AYLEG
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