| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4321 |
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| Symbol | |
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| ID | 5672676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5162344 |
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| End bp | 5163168 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641243194 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508611 |
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| Protein GI | 158316103 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.435201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGT TCGACGCGTT CCGATTCGAC GGGAAGCGGG TCCTCGTGGT CGGCGGCGCG
ACCGGCATGG GTGCCGCCGC CGCCGAGCTC GCCCAGGCAG CGGGCGCCGA GGTCATCGTC
GCCGACTACG CCGAGGTCAC CCTCCCCGGT GCGAAGTCGA TCCACGTGAA CCTCGCCGAC
GCCGCCTCCA TCGACACAGC CGTCGACCAG CTCGGCGGAC CCGTCCACGC CCTGCTCTCC
GCCGCCGGCG TCGCCGACGG CACCCCGGGC ATCGAGCGGA TCAACTTCAT CGGCCACCGC
TACCTCATCG ACCGCCTGCT GGCCGGCGGG CTGCTGCCCC GCGGCTCCGC GATCGGCTTC
ATCTCCTCCG CGGCCGGCCT CGGCTGGGAG GCCAACCTCC CGCTACTCAA GGAATACCTG
GCCATCACCG ACTTCGACGA AGCCACCAAG TGGGCCGTCG AGCACGGCAA GGCCGACTAC
ATGTGGAGCA AGCAGGCCGT CTGCGCCTAC GTCGCCACCC AGGCGATGCC CCTGCTCAAG
CAGGGCATCC GCATCAACGC GATCTGCCCC GGCCCCACCG ACACCCCCCT CGCCCAGACG
AACAAGGAGA CCTGGCTCGG CTTCGGCGCC GACTACCGGG CCGAGCTGGG CATCGAGGCC
GCGACCTCGC TGGAGCAGGC CTACCCGCTG CTGTTCCTCT GCAGCGACGC CGCCTCCGCC
ATCAACGGCA TCACCATCGT CACCGACTCG GGGTACTTCT CCGCCGGCCT CACCGAGGTC
TTCCCCCCGG CCACACCCAT CGTCCGGTTC CTCTCCGGCC GCTAG
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| Protein sequence | MTLFDAFRFD GKRVLVVGGA TGMGAAAAEL AQAAGAEVIV ADYAEVTLPG AKSIHVNLAD
AASIDTAVDQ LGGPVHALLS AAGVADGTPG IERINFIGHR YLIDRLLAGG LLPRGSAIGF
ISSAAGLGWE ANLPLLKEYL AITDFDEATK WAVEHGKADY MWSKQAVCAY VATQAMPLLK
QGIRINAICP GPTDTPLAQT NKETWLGFGA DYRAELGIEA ATSLEQAYPL LFLCSDAASA
INGITIVTDS GYFSAGLTEV FPPATPIVRF LSGR
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