Gene Franean1_4314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4314 
Symbol 
ID5672669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5154312 
End bp5155031 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content75% 
IMG OID641243187 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001508604 
Protein GI158316096 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.980038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGATC TCGAGTTGGA TGACGGGCTG GCCGTCATCA CCATCGACCG GCCGGAGGCA 
CGCAACGCCA TCTCGCTGGC GACCATGGGC GAGCTGGAGA AGGCGCTGGA CGCTGCCGCG
GGCGCGGGCG CACTCGTCAT CCGGGGCGCC GGCGACCGGG CGTTCGTCTC CGGCGGCGAC
CTCAAGGAGC TCGCCGCACT GCGGACCGAG GACGAGGCCA CCGGCATGGC GATGCGGATG
CGCCAGATCT GCGACCGGAT CGCGGACTTC CCCGCCCCGG TCGTGGCCGC GCTCAACGGG
CACGCGCTGG GCGGCGGCGC CGAGGTTGCG GTGGCCGCGG ACATCCGCGT CGCCGCCGAC
GACATCAAGA TCGGCTTCAC CCAGTCGACT CTGGCGATCA TGCCCGCGTG GGGCGGCGCC
GAGCGCCTGG CGGACCTGGT CGGGCGGGGC CGTGCGCTAC TGCTCGCCGG CACCGGCGTC
ACCCTCAGCG CGGCCGAGGC CGAGCGGCTC GGCCTGCTCG ACCGGGTCCT GCCCCGCGCC
GAGTTCGACG CGGGCTGGCG CGCGCTGGCG AGGTCGCTCG CCACTCCCCC GGCCCGGGCG
ATCAAGTACG TCATGAGCGG CGGGGTCGGC GCCGAGGACG CGGCCCGCAC CTTCGCCCAG
CTGTGGGTGG CGGACGAGCA CTGGGCGGCC GTCGAGCGGG CGACGAAGCG CCCCCGCTGA
 
Protein sequence
MIDLELDDGL AVITIDRPEA RNAISLATMG ELEKALDAAA GAGALVIRGA GDRAFVSGGD 
LKELAALRTE DEATGMAMRM RQICDRIADF PAPVVAALNG HALGGGAEVA VAADIRVAAD
DIKIGFTQST LAIMPAWGGA ERLADLVGRG RALLLAGTGV TLSAAEAERL GLLDRVLPRA
EFDAGWRALA RSLATPPARA IKYVMSGGVG AEDAARTFAQ LWVADEHWAA VERATKRPR