| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4216 |
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| Symbol | |
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| ID | 5672571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5022291 |
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| End bp | 5022908 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641243089 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508506 |
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| Protein GI | 158315998 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.235405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTCCG TGGGCATCGT GACGGGCGCT GGCCGCGGGA TGGGCGCCGC GTGCGCCGCG
CAGCTCGCCG ACCAGGTCGA CGTCCTCCTC CTCGTCGACC TGAACGAGGA GCTCATGACC
GAGACGGCGA CGGCCCTGAC GGGAGCCGGC CGTCGGGCCA CGGTCGAACT GTTCTCGTTG
GACATCGCCG ACGCCGGCGG TGTCGCACGG CTGGCCGCCC GCGTCTCCGA GCTGGGCACG
CTGCGTTCCG TCGCGCACGT CGCCGGCATC TCCCCCACGA TGGCGGACTG GCGCCGAGTG
CTGGACGTCG ACCTCGTGGG CAGCGCGAGG CTCACCGACA CCCTGTTGCC ACTCGCGACC
GCGGGCACGG CGATCGTGTG CTTCGCGTCG CTCGCGCCGC TGCTCACCGC GGCCACCGTG
GATCCAGTCC TGGACGCGGT GCTGGCCGAC CCGCTCGCCG CGGATTTCCT GGACCGGCTC
CGGGCGGCTG CCGGACCTGC GATCGAGGAC TCCGGAGCGG CCTACACCCT CTCGGACGCG
GCGAGCTTCG TCAACGGGAT CGACATTCTC GTCGCCGGAG GCGTTCGTGC CGCCCTCCTC
GGAACACCCG GCCGATAG
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| Protein sequence | MTSVGIVTGA GRGMGAACAA QLADQVDVLL LVDLNEELMT ETATALTGAG RRATVELFSL
DIADAGGVAR LAARVSELGT LRSVAHVAGI SPTMADWRRV LDVDLVGSAR LTDTLLPLAT
AGTAIVCFAS LAPLLTAATV DPVLDAVLAD PLAADFLDRL RAAAGPAIED SGAAYTLSDA
ASFVNGIDIL VAGGVRAALL GTPGR
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