| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4194 |
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| Symbol | |
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| ID | 5672549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4990793 |
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| End bp | 4991650 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641243067 |
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| Product | LuxR family GAF modulated transcriptional regulator |
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| Protein accession | YP_001508484 |
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| Protein GI | 158315976 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0104113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGG GCACTTCCGA TGACTGCTCG GTCGAGGCTT TGCTGCCTCG AGCCGTCACC
CGGCTGCGCG CCCGTACCGG CGCCGATCTG GCCTATGGCG GATCGGTCGA TCCCCGCTCG
CGCTACCTGA CCATCAGCGC GCTCGACGGG AACCGCACCA ACGCGCTGCG CGGCATGTCG
CTGCCGCCGG GCCACGGCGT GGGCGGGCGG GTCGTCGCGC TGGGACGGCC CGTCGTGATC
GACGCCGGCA CCCGCCCGCG CTACACCGAG GACCAGCGTG ACTGGGCCGT CCTCGGCGAG
GACATCTCCT CGGTGGTGGC CGTGCCGGTA CGCACCGGCG GAACCGTCCA CGCGGTGCTG
TACTGCGGCG TGCGGGCCGA CAACCCCGTC CCGCCGGCCG CCGTGGAGAC CGCGCTCAGC
GTCGCCCGCC GATTCGAGGC GTTCCTGGCC GAACGCACGA TGACGGCGCG CGCCGACGCC
GGCCCGACCC CGGGCGGCCC GGCGGGCGCG TCCCGGCTGC GGGTGCTGTG CCGGGTCGAC
GCCGAGCTGG AGGAGCTCAG CTACCAGGCC GGCGACCCGG CCCTGCGGGA ACGGATCGTC
GCGGTGCGCG ACCTGCTCGA GGACCTCTTC CCCGACACCG CGCCGCCGAC GCGGGCTCAG
CCCTTCGGGC TGTCCCCCCG CGAGCTCGAC GTCCTGCGGC TCGTCGCGGA GGGCATGTCC
AACGCGGAGA CCGCGCGCCG GCTCGCCGTC AGCCCCGAGA CGGTGAAGGC GTACCTGCGC
AGCATCATGA ACAAACTGGG GGTGCACAAC CGCACCGCGG CCGTGAACGT CGCGCGCCGT
TCCAGCCTTT TGCCGTGA
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| Protein sequence | MTSGTSDDCS VEALLPRAVT RLRARTGADL AYGGSVDPRS RYLTISALDG NRTNALRGMS
LPPGHGVGGR VVALGRPVVI DAGTRPRYTE DQRDWAVLGE DISSVVAVPV RTGGTVHAVL
YCGVRADNPV PPAAVETALS VARRFEAFLA ERTMTARADA GPTPGGPAGA SRLRVLCRVD
AELEELSYQA GDPALRERIV AVRDLLEDLF PDTAPPTRAQ PFGLSPRELD VLRLVAEGMS
NAETARRLAV SPETVKAYLR SIMNKLGVHN RTAAVNVARR SSLLP
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