Gene Franean1_4159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4159 
Symbol 
ID5672514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4941040 
End bp4941648 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content73% 
IMG OID641243032 
Productcob(I)yrinic acid a,c-diamide adenosyltransferase 
Protein accessionYP_001508449 
Protein GI158315941 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2109] ATP:corrinoid adenosyltransferase 
TIGRFAM ID[TIGR00708] cob(I)alamin adenosyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000454891 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.593362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGC AGGGGCAGCC CGCGCAGGTC CCCGACGACG GGCTGACGAC CCGCCAGCGC 
CGCGACCGTC CGCTGCTGAT CGTGCACACC GGGCAGGGGA AGGGAAAGTC GACGGCGGCG
TTCGGGTTGG CGTTGCGGGG CTGGGCGCAG GGCTGGCCGG TCGGGGTGTT CCAGTTCGTG
AAGTCGGCGA AGTGGCGCAT CGGGGAGGAG AAGGCGCTGC GGGTGCTCTC GGCCAGCGGT
GAGGGTGGGA CGGTGACCTG GCACAAGATG GGCCAGGGGT GGAGCTGGGT GCAGCGCCGC
ATCGACCCGG CCACCGACCC GGCGGGCGCG GCCGCCGAGG GGTGGGCGCA GATCGCCCGC
GATCTGACCG CCGGCACCTA CCGGCTCTAC GTCCTCGACG AGCTGACGTA TCCGCTGCGC
TGGGGGTGGA TCGACCTGGA CGAGGTCCTC GCCGTGCTCG CCGCCCGACC CGACGGGCAG
CATGTGGTGA TCACCGGCCG GGAGGCGCCG GCCGCGCTGG TCGACGCCGC GGATCTGGTC
ACCGACATGA CGAAGGTGAA GCATCCGATG GACGCCGGGC AGAAGGGGCA GCGGGGCATC
GAATGGTGA
 
Protein sequence
MAPQGQPAQV PDDGLTTRQR RDRPLLIVHT GQGKGKSTAA FGLALRGWAQ GWPVGVFQFV 
KSAKWRIGEE KALRVLSASG EGGTVTWHKM GQGWSWVQRR IDPATDPAGA AAEGWAQIAR
DLTAGTYRLY VLDELTYPLR WGWIDLDEVL AVLAARPDGQ HVVITGREAP AALVDAADLV
TDMTKVKHPM DAGQKGQRGI EW