Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4140 |
Symbol | |
ID | 5672497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 4922263 |
End bp | 4922865 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641243015 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001508432 |
Protein GI | 158315924 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.278605 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCAACAG GGGTGCACAT CCGCGACGCG CGCCAGCAGC TGTTCGACGC CGCCGAGCGC GTCCTGCTGC GGGATGGGCC GAGCGCGTTG ACCAGCCGGG CGGTCACCAC CGAGGCAGGT GTCGCCAAGG GAGTCCTGCA CCGACACTTC GCTGACTTTG ACGCTTTCCT CGTTGAGCTC GTGCAGGACC GCGTCGCCCG GATCGAGGCC CAGGCCGCCG CTCTGCGTCA ATCCGCCGGG ACTGGCACCG TCGCCGGCAA CCTCACCGGC GCGCTGATGG ACCTGTTCGA CTCGGTTGCT GTTGCGATCG TCGGCCTCGT CATCTGCAGG GACGAGCTGC GCATCCGGCT GCGCAAGGCC AGGTCCTCCC ATGGCATCCC GGTCTTGGCC GAGGCCAGCG TCATGATCGC CTCATATCTC GCCGCCGAGT GCGAACTGGG CCGCATCGCG GCCGACGTCG ACGCCGACTC GCTCGCGCTC TCGCTGATCG GGGCCGGACA CCTGCTGTTC GCGGGCCGGC AGGGCGCCCC ACCGGACGCT GGAGCTGTCG ACAAGGTTGT GACCACGGTC ATCGCCAATG TCATGCAAAG ACGGCTGCTG TAA
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Protein sequence | MPTGVHIRDA RQQLFDAAER VLLRDGPSAL TSRAVTTEAG VAKGVLHRHF ADFDAFLVEL VQDRVARIEA QAAALRQSAG TGTVAGNLTG ALMDLFDSVA VAIVGLVICR DELRIRLRKA RSSHGIPVLA EASVMIASYL AAECELGRIA ADVDADSLAL SLIGAGHLLF AGRQGAPPDA GAVDKVVTTV IANVMQRRLL
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