Gene Franean1_4073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4073 
Symbol 
ID5672431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4856261 
End bp4856797 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content78% 
IMG OID641242949 
Producthypothetical protein 
Protein accessionYP_001508366 
Protein GI158315858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000644003 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGAC TGCCGCGCCG AGCTGACCCG GCTGGCCGGG CTGCCGGGCC TGCTCTCCCG 
CCTGCGCCTC GCCGACGTCA CCGATCCCCC GCCCGCCGCC ACGGCGGGCG AGCCCGGTCC
CGGCGCACGG CACGCCGGCG GCACGCGCTG GCCGCCGCGG CGCTGGCCGC CGTCGTCGCC
GGCGGGTCGA TCACGGGCAC CGTGGCGCTG ACATCCTCGT CGGACGGGCC GGCGGGCCGG
CTGGTGTCGG CGGCGGACGC GACCACCCGC GTGTGGGCGG AGGTCTGGGT GGCCGACGTC
CCCTCCGGCG CGGGCTTCAC CATCCGGCTG TGGGGCGTAC GGCCGGGAAC GACCTGCGCC
CTGGTCGCCG TGTCCGAGGA CGGCAGCAGC GACACCGCGG CGACCTGGAC CGCCGACTAC
CGCGGCGCGG TCGACGTACG CGGGACGTCC GCCATCCCGG CAGGACGGCT CGTACGTGTC
GTGGTGGTCA GCGGCACCGG CGAGGACCTG CTCACCGTCC CGGTCCGCAC CACCTGA
 
Protein sequence
MSRLPRRADP AGRAAGPALP PAPRRRHRSP ARRHGGRARS RRTARRRHAL AAAALAAVVA 
GGSITGTVAL TSSSDGPAGR LVSAADATTR VWAEVWVADV PSGAGFTIRL WGVRPGTTCA
LVAVSEDGSS DTAATWTADY RGAVDVRGTS AIPAGRLVRV VVVSGTGEDL LTVPVRTT