Gene Franean1_3998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3998 
Symbol 
ID5672358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4781241 
End bp4781654 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content71% 
IMG OID641242876 
Producthypothetical protein 
Protein accessionYP_001508293 
Protein GI158315785 
COG category[S] Function unknown 
COG ID[COG5502] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGAGG TGAAGCTGTT GAAGCAGGAC GAGATCGTCT CCGCCGTTCG CGGGACCGCC 
CGGATAGACA GCGTCGAGCA CGCCGAAGCC GCCGTGCGGG CGACTCTGTC GGTACTCGGC
GAGCGGTTGT CCGGCGGGGA GACCAAGGAC CTGGCCTCCC AGCTCCCGTC GCCGTTCGCC
CAGGCGCTGC CGCCAGCCGG CCGTGGCGAA CGGTTCGGGC TCGACGAGTT CTATCGGCGC
GTCGCCGAGC GGGAAGGCGA GGGCTGCGAC GAGGCGCATG CCCGCCAGCA TGCCCGGGCG
GTGGTCGCGG CGCTGAAGGC GTCGATCAGT CCGGACGAGT TCGAGGACGT CGCTGGGCAG
CTCCCCAGCG ACTACGCCGA CCTGCTGGGC CGCGAGCCGG TCATCCACTA CTGA
 
Protein sequence
MGEVKLLKQD EIVSAVRGTA RIDSVEHAEA AVRATLSVLG ERLSGGETKD LASQLPSPFA 
QALPPAGRGE RFGLDEFYRR VAEREGEGCD EAHARQHARA VVAALKASIS PDEFEDVAGQ
LPSDYADLLG REPVIHY