| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3991 |
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| Symbol | |
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| ID | 5672351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4776163 |
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| End bp | 4776723 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641242869 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001508286 |
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| Protein GI | 158315778 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.75873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.554715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGGC CCGAGCCGGG CAGCGACGAG GCGTTGTTGC GCGCGGTCGC CGCCGGCGAC
GCGGGCGCGC TGACTCGGCT CTACGAGCGG CACGCCGGCG CGCTGTTCGG CTACCTGTAC
CGGCTGGCCG GCGACCGGAT GACCGCCGAG GAGATCCTCC AGGACACGAT GCTGGCGGTC
TGGCGGTCGG CCGTCGCCTT CGAGGGCCGC TCGAAGGCGA GCACGTGGCT GTTCGGGGTC
GCCCGCCGCC AGGCGCACAA CCGGTTGCGC GGCCGGTTCG GCCCGGAGAC CATCGGCGTC
CCTCTGCTCG ATCGGCCCGA CCAGGGCGCC GGCCCCGACG AGTTGGCGAT CGCGGCGGCG
GGAGGCACAC CGGTGGCCGC GGCCATCGAC CGGCTGCCCG ACTACCACCG CGACGTGATC
GCCTTGGTGT TCGTGGCCGG CCTGCCGCTC GCCGACGTCG CCGAGGTGCT CGCGATCCCC
GTCGGCACGG TGAAGAGCCG GCTGCATCAC GCCCGGGCCG CCGTCGCCGC CGCGCTCACC
GCCCAGGAGG TGCCCGAATG A
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| Protein sequence | MARPEPGSDE ALLRAVAAGD AGALTRLYER HAGALFGYLY RLAGDRMTAE EILQDTMLAV
WRSAVAFEGR SKASTWLFGV ARRQAHNRLR GRFGPETIGV PLLDRPDQGA GPDELAIAAA
GGTPVAAAID RLPDYHRDVI ALVFVAGLPL ADVAEVLAIP VGTVKSRLHH ARAAVAAALT
AQEVPE
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