| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3963 |
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| Symbol | |
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| ID | 5672324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4745045 |
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| End bp | 4745992 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641242842 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001508259 |
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| Protein GI | 158315751 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.424952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGA GATATCTCGC GTCGTTCCTC GCCATCGCCG AGGAGCTTCA CTTCGGCCGC
GCGGCGGCCC GCCTGCACCT GGCCCAGCCC TCGCTGAGCC AGCAGCTTCA GCGGCTGGAA
CGCGACATCG GCGTCGAGCT GGTCTCGCGC AGCTCGCACG AGGTCAAGCT GACCGCCGCC
GGCCGCGCCT TCGAGACGGA GGCCCGCCGG CTGCTCGACG CCACCCGGCG GGCCGTCACC
GTCGCCCGCG AGGCGGCCTC GGGGCGGACG GGGATGATCA GCATCGGCTT CAACTACCCC
GCCGGCCAGC GGGTGCTCCA GCCGACGCTG CTGCGCCTGG CGGCCGAGTA CCCGGGCGTG
TCGACGACGC TGTGGGAGGC CCGCAGCGGG CCGCAGCTGT CCGCGCTGGC CGAGGGACGG
CTTGACGTCG CGCTGGTCTT CGCCGGGCCG CCCTCGGCCC AGCTGCGCTC CCAGCGGGTG
CTCACCGTGC CGCTGGTCGC GGTGGTCAGC CGGCGCCATC CCTGGGCGGC CCGGTCCGAG
GTTCCCTTCC GGGAGCTGGC CGACCAGCCG TGTGTCCTGT TCCGGCGGGA GCAGAGCCCG
GCGATGCACG ACGCGATCCT CGCCGCCGCC GACCGCTGTG GCATCGCGCT GACCGTCTCC
GACGAGGTGG ACGACTCCGG CGCGACCGGG ATCGTGGTGA CCACCAAGCC GGTGGTCGGG
TTCGCCTCGG CCGCGCGCGG CGCGCACCCA CCCGGTCACG GGCTCGCCGC GGTGCGCCTG
GTCGACCCGA CCCCGACAGT CGGCATGTAC GCCGTGTGGC GCCCGGACCC ACAGCCCGTG
GTCGGCGCCT TCCTGGACTG CCTCGAGGCC GCCGGCCCGT TCACCGAGCC CGGCCCGCCC
GCGGCGGTGG CACCGGCACC GGCACCGGCA CCGGTCAAGG AGAGCTGA
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| Protein sequence | MELRYLASFL AIAEELHFGR AAARLHLAQP SLSQQLQRLE RDIGVELVSR SSHEVKLTAA
GRAFETEARR LLDATRRAVT VAREAASGRT GMISIGFNYP AGQRVLQPTL LRLAAEYPGV
STTLWEARSG PQLSALAEGR LDVALVFAGP PSAQLRSQRV LTVPLVAVVS RRHPWAARSE
VPFRELADQP CVLFRREQSP AMHDAILAAA DRCGIALTVS DEVDDSGATG IVVTTKPVVG
FASAARGAHP PGHGLAAVRL VDPTPTVGMY AVWRPDPQPV VGAFLDCLEA AGPFTEPGPP
AAVAPAPAPA PVKES
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