Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3958 |
Symbol | |
ID | 5672319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 4738427 |
End bp | 4739707 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641242837 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001508254 |
Protein GI | 158315746 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.100239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0392738 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCG CTGAGGTGGC CCCGCCCCAC ACGGGCAACG GCACGACACC GGACGGCACG GCGACGGGCG GCACGGCGAC GGGCCTCGTC ACGGGGGCCG CCGACGTCGG CGAGCTCGCG CGGCGCACCC TCGCGTTTGT GCGCGACGAC GTGCTGCCGA TCGAGCGCGA GCTGATCGTC GCGGGCCGGC ACATGGACGA CGACGTCCGC GTCGGCCTGC AGCGGGCGGC CCGCGCGGCG GGCGTCTTCG GGCCGCTGAC GCCGGTCGCG CTCGGCGGGC TCGGCCTGGA CAACGCCGGT CTCGCGGAGG TGCTCGAGGC CGCCGGGACG AGCCTCATCG GCCCGATCGC CGTGAACTGC GCGGCGCCCG ACGACGGGAA CATGCACCTG CTCGCCGACG TCGCGACGCC GAGCCAGGCC GAGCGCTATC TGCACCCACT GCTGCGCGGC GAGACCCGCT CGGCGATCGC GCTCACCGAG CCGGCGCCGG GCGCGGGCTC GGACCCGTCA ATGGTCCGCA CGACGGCGCG GCAGGTCGAC GGCGGCTGGG TCATCGACGG GGCGAAGCAC TTCATCACCG GGGCTGAGGG CGCCGCGTTC ACGATCTGCA TCGCCCGTAC CGAGGGCGGC ACCACCATGT TCCTGGTCGA CCAGGACAAC CCCGGCCTGG CCGTCGGACG GCGGATGCCC ACCCTGGATC ACAGTGCCCC GGGCGGGCAC TGCGAGGTGA CGTTCGCCGA CTGTTTCGTC CCCGACGAGG CGGTACTCGG CGACGTCGGC GCCGGGCTGC GCTACGCCCA GGTGCGGCTG GCCCCGGCCC GGCTCGCGTT CTGCATGAGC TGGCTGGGGA TCGCCGCCCG GGCACACGGC ATGGCGGCCG AGTGGATCCA GCGCCGGAGC TCGTTCGGCC GGCCGATCTC CGAGCACGGC ATGGCCCAGG CGCACGTCGC CGACAACGAG ATCGACATCG CCGCCGCCCG CGCCCTGGTC CGCTCGGTGG CCCGGGTGCT CGACGAGCAG GGTGTGGCCA GCTCCGCCGC GCGGCACGGC GCCGCGATCG CCAAGACGTT CGTCGCCGAG GCGGTGTGGC GGGTCCTGGA CCGGGTCGTG CAGCTCTACG GCGGCCTCGG GATCTGCGAG GACCACCTGG TGGCGCGCTT CCTCGTCGAG GCCCGCGGGT TCCGCATCTA CGAGGGCTCG TCCGAGGTCC TGCGCACCTC CATCGCCAAG CGGGTGCTGC GGGCCCACCA GCCGGCCACC ATCGGAGAGG AGACACGGTG A
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Protein sequence | MSTAEVAPPH TGNGTTPDGT ATGGTATGLV TGAADVGELA RRTLAFVRDD VLPIERELIV AGRHMDDDVR VGLQRAARAA GVFGPLTPVA LGGLGLDNAG LAEVLEAAGT SLIGPIAVNC AAPDDGNMHL LADVATPSQA ERYLHPLLRG ETRSAIALTE PAPGAGSDPS MVRTTARQVD GGWVIDGAKH FITGAEGAAF TICIARTEGG TTMFLVDQDN PGLAVGRRMP TLDHSAPGGH CEVTFADCFV PDEAVLGDVG AGLRYAQVRL APARLAFCMS WLGIAARAHG MAAEWIQRRS SFGRPISEHG MAQAHVADNE IDIAAARALV RSVARVLDEQ GVASSAARHG AAIAKTFVAE AVWRVLDRVV QLYGGLGICE DHLVARFLVE ARGFRIYEGS SEVLRTSIAK RVLRAHQPAT IGEETR
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