| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3920 |
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| Symbol | |
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| ID | 5672281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4687062 |
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| End bp | 4688633 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641242799 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001508216 |
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| Protein GI | 158315708 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.407855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0244216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGTA AGTCCCGGTT AGTCGCCACC GCTGTCGTGT GCGGCGCGGC ACTCGCCCTG
GGGGCCTGTG GTGGTGGAGG CGGTGACGAC GCCACCTCGT CGACGAACGG CGCCGCGGGC
CAACCGGTCG CCGGCGGCGA GGGCCGGATC CTGCTGCTGG GCGACCCGCG CAGCCTGGAC
CCGGCGACCC TCAGCAACCA GGCCGCGATC ACCGCCCCGG TCGGCAACGC GCTGTACGGC
ACGCTGATGA TCACCGACCA GGCCGGCAAG GTCAAGTACA CGATGGCCGA GTCGTTCGAC
ACGACCGACA CCGGCAAGAC CTTCACCCTC AAGCTGAAGC ACGGCCTGGT GTTCTCCGAC
GGCAAGCCGC TCAACGCGGA GGCCGTCAAG TTCAACTGGG ACCGCATCAA GGACCCGACC
GTGGGCTCCT CCTACGTCGT GGACGCGCGG ATGATCGAGT CGACCGAGGT GGTCGACGAC
GTGACACTGA AGGTCACGAT GGTCAACCCC GTGCCGGCGT ACGCCCAGGC CGTCCTGAAC
TCGTCACTGA ACTGGATCGC CTCGCCCGAC GCTCTGAAGG CCGGACGGGA CTCCTTCGAC
AAGAACCCGA TCGGCGCCGG GCCGTTCACC CTGGCGAGCT GGACCCGCCA GGCGGACATC
AAGTTCGTCA AGAACCCCAA GTACTGGGAC GCGCCCAAGC CCTACCTGGA CCGCCTCACC
ATGCGCTCGG CGACCGACGC CACCCAGCGC CTCAACACGG TGATCAGCGG TGGCGCCGAC
GTCGCGATCG ACACGAACAC GGTCAACATC GACAAGGCTG AGACGTCCGA TCTCAACGCG
GTCGTGACCA CCCTCAACGG CGGCAACTTC ATGGCGTTCA ACTCGCGCCG GGCGCCGTTC
GACGACATCC GTGCCCGCCA GGCGGTGTCG GCGGCGATCG ACCTCGAGGC GCTCAACCTC
GCCGCCTACA ACGGCACCGC TCCCCTGCCC GACACGCTGT TCGACAAGAG CTCACCTCTC
TTCTCGGACA CGCCGCTACA CAAGACGGAC AAGGCTCTCG CCCAGAAGCT CCTCGACGAG
CTCGCCGCCG ACGGCAAGCC GGTGAAGTTC ACCTTCTCCA GCTTCCCGTC CTCGGAGAAC
CGGGCGATCG CGGAGAACAT CCAGGCCCAG CTGAGCGCCT TCAAGAACAT CACGGTCTCC
GTCAAGATCG TCGACCTCGG CCAGGTCGCG GCGCTGCGCA CGACCTTCGA CTTCGACCTG
CTCGTCTCGT CGGCGTCGTT CCAGGACCCG GAGCCGCGGC TGTGGCAGGC GTTCAGCCAG
GACTCCGTGG CGAACCTGTC CGGTGTCAAG GACAAGGAGC TCTCGGACGC GCTGCTCGCG
GGTCGCACCG CGACGACGGA GGCGGACCGC AAGGCCGCCT ACGAGACGGT GCAGGAGCGG
CTGGTCGCGC TCAGCCCGGT CGTGTTCTAC CAGCGGTCGA CGAACGCGGC GATCGGCACC
GCCAAGGTCG GCGGGATCGT CCAGTACGGC AGCGGCTCGC TGCTGGTCGA GGAACTCTGG
ATCAAGAAGT AG
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| Protein sequence | MFRKSRLVAT AVVCGAALAL GACGGGGGDD ATSSTNGAAG QPVAGGEGRI LLLGDPRSLD
PATLSNQAAI TAPVGNALYG TLMITDQAGK VKYTMAESFD TTDTGKTFTL KLKHGLVFSD
GKPLNAEAVK FNWDRIKDPT VGSSYVVDAR MIESTEVVDD VTLKVTMVNP VPAYAQAVLN
SSLNWIASPD ALKAGRDSFD KNPIGAGPFT LASWTRQADI KFVKNPKYWD APKPYLDRLT
MRSATDATQR LNTVISGGAD VAIDTNTVNI DKAETSDLNA VVTTLNGGNF MAFNSRRAPF
DDIRARQAVS AAIDLEALNL AAYNGTAPLP DTLFDKSSPL FSDTPLHKTD KALAQKLLDE
LAADGKPVKF TFSSFPSSEN RAIAENIQAQ LSAFKNITVS VKIVDLGQVA ALRTTFDFDL
LVSSASFQDP EPRLWQAFSQ DSVANLSGVK DKELSDALLA GRTATTEADR KAAYETVQER
LVALSPVVFY QRSTNAAIGT AKVGGIVQYG SGSLLVEELW IKK
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