Gene Franean1_3898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3898 
Symbol 
ID5672259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4662145 
End bp4662702 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content62% 
IMG OID641242777 
Producthypothetical protein 
Protein accessionYP_001508194 
Protein GI158315686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.684129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0469485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGACCA CTCGGGTTCT TAGCACCCGG GTGATACGTG AGCTGCTAGG TTTCACCGCG 
ACGCTGATGG ACGAGTACTG GGGCCAGATG CAGTTGGATG CGCCGACCGG CCGGGTTGCC
TGGATGGGAC CCGAGCCAGT GCCGGTATGG CTGGGCATCG GGCGGGATTT CACCGAGCAC
TGGGTTCATG GCCGGCAGAT CCGTGCCGCC GTTGGCGCTC CCGGACTCGA TGACGACTAC
TACTTGGGCA CTGTGCTACG CGTCTTCATC TGGGGCCTGA CCTACCACTA CCGGTCCAAA
ACCGGCCCGG ATATCGATCT GGTCATTGAG TTCACCGGCG AGACGGCCGG CGTCTGGACG
CTGCAACGCC GCAGCGAAAG CTGGGACCTC ACCGAAAGCC GAGTTTCTGC CGCGTCGACT
TTGGTCCGGA TGCCGGCAAC AGTAGCCTGG CGACTGTTTA CCGGGGCCTT GAGCGACCGC
GAACTCAAGC TCATCGAGCG GACGGGTGAT CTCGACTTTG CCGACCATCT GCTCGCTGCC
AGATCAATCA TCATCTGA
 
Protein sequence
MKTTRVLSTR VIRELLGFTA TLMDEYWGQM QLDAPTGRVA WMGPEPVPVW LGIGRDFTEH 
WVHGRQIRAA VGAPGLDDDY YLGTVLRVFI WGLTYHYRSK TGPDIDLVIE FTGETAGVWT
LQRRSESWDL TESRVSAAST LVRMPATVAW RLFTGALSDR ELKLIERTGD LDFADHLLAA
RSIII