| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3822 |
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| Symbol | |
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| ID | 5672186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4540063 |
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| End bp | 4541799 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641242701 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001508121 |
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| Protein GI | 158315613 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.112104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0443202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGACCC CCGAGACTTA CGGCGCGCTG CCCGTCCTCT ACCTGGACGG GAAGCCGGTG
CCGCCCGCGA TCAAGGAGAC TATCCTGCGG GTCGTCGTGG ACAGCGACGT CGCGGCGCCG
GACGCCTGCC GCGTGGTACT CAATGACCCC GGCCGGGACG TGCTCGCGGC GGCCGGGTTC
GACTTCCGCC ACGCGCTGAA GGTCACCGCG CCGCCGAGGG CCACCCCCGA GGGCGGGGGC
GCGGAGAAGG TCCTCTTCGA GGGCACCATC TACAGCCTCG GCTTCGGCTA CGACGAGCGG
GGCGCGACCG CTGTCGTGGT GGCCTACGAC AGCTCATACG CTCTGTTCAA CGGCGTGCAC
ACGGCCACAT ACCACAACGT CACCGACTCC GACCTGGTGA CGAAGATCGC CCGCGAGCTG
AGCATAGACA CCGGCACGAT CAATCCGACG ACGGTCGTCC ACGAACACGT CGGCCAGGTC
AACGAGACGC ACTGGGACTT CCTCACCCGA AGGGCCAGAG AGGTCGACCA CGTGCTCCGG
GTACGGGACA ACAAGATGGA GTTCGTCCGT CCCACCGCCG CCGACGACGC GCCCAGGCCG
GGCAACTTCG ACAGCCCGAG CCACCTGCAG CTCACCCCAG GTGGCGACCT GGACGTCTTC
ACCGCCCGGG TGACCGCCGC GCAGCAGGTG TCCGAGGTCG AGGTCCGCGG CTGGGACGAC
CGGGGCAAGC GCGAGCTGGT GGCCACCGCA CGGGCGAGCA CTCGCGCCGC GCAGATCAAG
GACGACCCGG CCGACCTGGG GGCGGGCAAC TCCTCCGCCC GGTACGTCGC TCCCGCCCGG
CCGCTCGCGA CGCAGGCCGA GTGCGACGCG ATGGTCGCCG CGGTCGCCGA GCGGATCGCC
AGCACCTCGG TCGCCGCCGA GGGCGTGGCC CACGGAGATC CGCGCATCCT CGCCGGTGTG
GCGCTGAGCG TGGGCCGGAC CGGGGGGAGC TTCGACGGCA AGCTCACCGT CTCCCACGCC
GAGCACGTCT TCGACCACGC CAGCTACCGC ACCCGGTTCA CGGTGAGCGG GCCGCACGAC
CGGTCCCTGC TCGGTCTGGC CTCGGCCGCC GGCGCCCGGC AGAGCAGCCC GCTGATCGCC
GGTGTGGTGC CGGCCGTCGT CTCCAACATC AACGATCCGG AGTCCCGCTG CCGGGTGCGG
GTGAAACTGC CCTGGCTGTC CGCGGACTAC GAGACCGACT GGGCCCGGGT CGCGATCGCC
GGCGGCGGCC CGGACCGCGG GATGCTGGTG CTGCCCGAGG TCAACGACGA GGTGCTGGTC
GCTTTCGAGC AGGGTGACCC GCGCCGCCCG TTCGTGCTCG CCGGCCTGTA CAACGGTGTG
GACGCGCCGC CCTTCGGCGG CGGCGTCGAC ACCGCCGCCG GCACCGTCGT CCGGCGCGGC
CTGCGCACCC GGAAGGGCCA CGAGATCGTG GTCAGCGACG CCGACGGCGA CGAGCACGTG
GAGATCCGCA CCCGGGACGG CAAGGTGCGG ATCCGGCTCG ACCACGACCA GGGCGGGCTC
ACCATCGAGA CCGACGCGGA CATCGACGTC CGGGCCAAGG GGAAACTGTC GCTCACCGCC
GAGCAGGACC TGACGATCTC CGCGCGGGGT ACCGGGTCGA TCTCTGCTGA CGCCGGCCTC
ACCCTGTCCA GCCGCGCGGA CGTCACAGTG CAGGGAAACC CGATCAAGCT CAACTGA
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| Protein sequence | MATPETYGAL PVLYLDGKPV PPAIKETILR VVVDSDVAAP DACRVVLNDP GRDVLAAAGF
DFRHALKVTA PPRATPEGGG AEKVLFEGTI YSLGFGYDER GATAVVVAYD SSYALFNGVH
TATYHNVTDS DLVTKIAREL SIDTGTINPT TVVHEHVGQV NETHWDFLTR RAREVDHVLR
VRDNKMEFVR PTAADDAPRP GNFDSPSHLQ LTPGGDLDVF TARVTAAQQV SEVEVRGWDD
RGKRELVATA RASTRAAQIK DDPADLGAGN SSARYVAPAR PLATQAECDA MVAAVAERIA
STSVAAEGVA HGDPRILAGV ALSVGRTGGS FDGKLTVSHA EHVFDHASYR TRFTVSGPHD
RSLLGLASAA GARQSSPLIA GVVPAVVSNI NDPESRCRVR VKLPWLSADY ETDWARVAIA
GGGPDRGMLV LPEVNDEVLV AFEQGDPRRP FVLAGLYNGV DAPPFGGGVD TAAGTVVRRG
LRTRKGHEIV VSDADGDEHV EIRTRDGKVR IRLDHDQGGL TIETDADIDV RAKGKLSLTA
EQDLTISARG TGSISADAGL TLSSRADVTV QGNPIKLN
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