Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3820 |
Symbol | |
ID | 5672184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4538838 |
End bp | 4539374 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641242699 |
Product | phage tail protein |
Protein accession | YP_001508119 |
Protein GI | 158315611 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02241] conserved hypothetical phage tail region protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0449238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0664032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTTTGC TTCGACCACC GTCCGGGGCG TTGGCCCCAT CCCGCGCGTC GGCGGTGCGC TCCGGCGGTG CCGCCTCGGC GGCGTCGGCC GGCGGAGGCC TCAAGCCCCA GCCGGTGAAC GGCCTGCGTT TCGAGGTGAC CATCGGCGCC TTCGAGCTCG GCGCCTTCAC CGCGATCGAG GGGCTGGAGG CCAACTACGA GATCAAGACC TATGACGAGG GCGGCCAGAA CGGCTTCCAG CACCAGCTCC TCGGCCGGGT GCACTACCAG AACGTCAAGC TGACCCGGCC GGTCGATGAG AACAGCGGGA ATCTGAGCGC CTGGTTCACC GCCTTCCGCC GGGAGGCGGC CGGTAAGCCG ACGACCGCCT CCATCGCCGC GTTCAACGAC AATCTGAAGC GCGTCGCCCA GTGGTCGATG GCCGGCGTCT GCCCGGTCCG GTACTCCGGG CCGCGTTTCT CGACCAGCGA CGCGAAGATC GTGACCGAGA CCCTGGAGTT CGCCCATCAG GGCTTCACCG CGGAGTTTCC GAAATGA
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Protein sequence | MSLLRPPSGA LAPSRASAVR SGGAASAASA GGGLKPQPVN GLRFEVTIGA FELGAFTAIE GLEANYEIKT YDEGGQNGFQ HQLLGRVHYQ NVKLTRPVDE NSGNLSAWFT AFRREAAGKP TTASIAAFND NLKRVAQWSM AGVCPVRYSG PRFSTSDAKI VTETLEFAHQ GFTAEFPK
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