Gene Franean1_3817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3817 
Symbol 
ID5672181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4535508 
End bp4535948 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content63% 
IMG OID641242696 
Productphage tail protein 
Protein accessionYP_001508116 
Protein GI158315608 
COG category 
COG ID 
TIGRFAM ID[TIGR02241] conserved hypothetical phage tail region protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0125737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.215522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCATCG GCGAGGACGC GCTCGGTAAC TACGCCTACC AGATCGAGAT CGACGGCGTG 
ACGATCGCGC AGTTCAAGGA GGTCTCCGGG CTCAGCGCCG AGATCCAGGT GATCGAGCAC
AAGGAGAACA AGAAGGGCGG CATTCCGGTC ATCAAGAAGC TGCCCGGCGC CCGCAAGTGG
GGCGACATCC AGCTCAAGCG CGGGAAGACG GATGATCCGA GCTGGTGGAA GTGGATCAAG
CAGGTCCAGG AGGGAAAGAT CGACGAAGCC CGGAAGCACG GGTCGATCGT TCTCTACGAC
TACGCCAGGG GCGAGAAGGC GCGCTTCAAC TTCACCAACG CCTGGCCCTC GAAGGTGAGC
CTCGGCAGCC TGCAGGCGGG TGGGAGCGAG ATCATCATCG AGGAGGTCAC GCTCGTCCAC
GAGGGGCTTG AGCTGGCATG A
 
Protein sequence
MPIGEDALGN YAYQIEIDGV TIAQFKEVSG LSAEIQVIEH KENKKGGIPV IKKLPGARKW 
GDIQLKRGKT DDPSWWKWIK QVQEGKIDEA RKHGSIVLYD YARGEKARFN FTNAWPSKVS
LGSLQAGGSE IIIEEVTLVH EGLELA