| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3783 |
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| Symbol | |
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| ID | 5672147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4485921 |
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| End bp | 4486907 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641242662 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_001508082 |
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| Protein GI | 158315574 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.83161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGATC ACCGGAGTCC CAGCCGCACG CGGGCGTACG AGGGGCGCCC GCTGGCCCGG
CCCGACGAGG AGATCGTTGA CCAGGGCCTC GCCTTCGACG TCGGCACACT GCTGAGCCGG
CGGCGGATGC TGGCGTTCTT CGGCCTCGGC GCCGCGTCGG CCGGCCTGGC GGCCTGCGGC
TTGGACTCCG CCGGATCCAC TGCCTCAGCC ACCTCGGGGA CGTCCGCCTC GGCGGCCTCG
GCCGCGACGA CGTCGGCCAC GATCGGCGCG GCGGCCGGGG AGATCCCCGA GGAGACCGCG
GGCCCCTACC CGGGCGACGG GTCCAACGGG CCGGACGTCC TCGAGCAGAG CGGTGTGGTC
CGCAGTGACA TCCGGTCCAG CTTCGGCGAC TCGACCGGTA CCGCCGAAGG CGTCCCCATG
ACGCTGGCGC TGACGGTCCG CGACCTCGCG AACAGCGGCA CGCCCTTCGC CGGGGTGGCC
GTGTACGTGT GGCACTGCGA CCGAGAGGGC CGCTACTCGC TGTACTCCGA CGGCGTCACC
GACCAGAACT ACCTGCGCGG GGTCCAGGTC GCCGACTCCG CCGGCATGGT CCGTTTCACC
AGCGTCTTCC CGGCGTGCTA CTCGGGACGC TGGCCGCACG TCCACTTCGA GGTCTATCCC
GACCAGGCCA GCATCACCGA CTCGTCCAAG GCCATCGCCA CCTCGCAGCT CGCGCTGCCG
CAGGACGTCT GCGCCAAGGT CTTCACGCAG CCGGGCTACG AGGCGTCCGT GCGCAACCTG
GCGCAGGTCA GCCTCGACAG CGACGGTGTC TTCGGGGACG ACGGGGCTGC CAGCCAGCTC
GCCACCGTCA CCGGTGATGT CACCGGCGGC TACGCGGTCT CTCTCGCCTT GGGCGTCGAC
ACGTCGACGG CCGCGGGCGG CGGTCAGATC TCCGGCGGCG GCGCGCCGGG CGGCGCACCC
GGGGGCCGGG CGCCTGGCGG GCGGTGA
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| Protein sequence | MADHRSPSRT RAYEGRPLAR PDEEIVDQGL AFDVGTLLSR RRMLAFFGLG AASAGLAACG
LDSAGSTASA TSGTSASAAS AATTSATIGA AAGEIPEETA GPYPGDGSNG PDVLEQSGVV
RSDIRSSFGD STGTAEGVPM TLALTVRDLA NSGTPFAGVA VYVWHCDREG RYSLYSDGVT
DQNYLRGVQV ADSAGMVRFT SVFPACYSGR WPHVHFEVYP DQASITDSSK AIATSQLALP
QDVCAKVFTQ PGYEASVRNL AQVSLDSDGV FGDDGAASQL ATVTGDVTGG YAVSLALGVD
TSTAAGGGQI SGGGAPGGAP GGRAPGGR
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