Gene Franean1_3738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3738 
Symbol 
ID5672103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4425279 
End bp4426226 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content74% 
IMG OID641242619 
Productalcohol dehydrogenase 
Protein accessionYP_001508039 
Protein GI158315531 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCAC TGAATGTCCC GGCCGCGGGC GAGCAGCCCC GGCTGTCTGA CCTGCCTGTC 
CCCGGGCCCG TCGAGGGCAC CGTGCTGGTC CGTGTGAAGG CAGCCGGTCT CAACGCCATC
GACAACGCCC TGGCCGCCGG AATGATGGCC GAGATGCTGC CGCACCTATA CCCGCTGGTC
CTCGGTCGTG ACGCCGCCGG CGTCGTCGAG GCCGTCGGAG CCGGCGTCGA CCACGTCGCC
GTCGGCGACG AGGTGATCGG CCACATGCTG CTGGTCCCAC CGATTCAGGC CGGCACCCTC
GCCGAGTACG CACTGCTGCC CGCTGCCGCC GTCACCCGCA AGCCCGCCGG CCTCGACTTC
ACCACCGCCG CGGCACTCCC CCTCGCCGCA GCCGCCGCCA AGACGGCCGT CGACGCCGTC
GAGCCTGAGC CGGGTCAGAC TGTTCTCGTC GTCGGGGCCG GCGGCGGCGT GGGTTCGTAC
GCCGTCCAGC TGCTCGCGGC ACGCGACGTC ACCGTCGTGG CCACCGGCAC CGCCGCCGAC
GCCGGCCGGC TGACCGCGCT GGGCGCGACC ACCGTCGTCG ATTACACCGC CGGCCCGGTC
GCCGAACAGG TGCGCGCCGC CTACCCCGAC GGTGTCGACG CCCTGATCGA CCTCGTCGCC
TACACCCCTG ACAGTGCGCC TCTGGACGTG GTCCGCAAGG GCGGCAAGGT CGCCAGCACC
CTGGGCGCCG CCGACGAAGA GGCCCTCGCC GCCGCCGGCC TGACCGGCAC CAGCGTCATG
GCCGCCCCCG TCCGCGAGCT CATCGCGGAG CTTGCCGCCC TGGCTGCCGC CGGCACCCTG
AAGGTCGACA TCACCACCGT CCTGCCCCTC GAGAAGGCCA CCGACGGGCT GGCCACTCTC
GCCAGCGGTG CCGCCCGCGG AAAGATCGTC GTCGAGATCG GCGACTGA
 
Protein sequence
MRALNVPAAG EQPRLSDLPV PGPVEGTVLV RVKAAGLNAI DNALAAGMMA EMLPHLYPLV 
LGRDAAGVVE AVGAGVDHVA VGDEVIGHML LVPPIQAGTL AEYALLPAAA VTRKPAGLDF
TTAAALPLAA AAAKTAVDAV EPEPGQTVLV VGAGGGVGSY AVQLLAARDV TVVATGTAAD
AGRLTALGAT TVVDYTAGPV AEQVRAAYPD GVDALIDLVA YTPDSAPLDV VRKGGKVAST
LGAADEEALA AAGLTGTSVM AAPVRELIAE LAALAAAGTL KVDITTVLPL EKATDGLATL
ASGAARGKIV VEIGD