Gene Franean1_3730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3730 
Symbol 
ID5672095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4416901 
End bp4418001 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content67% 
IMG OID641242611 
Producthypothetical protein 
Protein accessionYP_001508031 
Protein GI158315523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCA GAGCCGGGAT CGGCAGGAGT GTCCCGGCCC CGGGCATGCC AGCCGGGCCA 
GAGGCCCTGT GGAAGGAGCG GATCCAGTCC ATCCCATCCG CCGATCCCCA ACCCGCTCAT
GCGGCCTGGG CCGACAGCGG AACCCACCCA CCCACCGGGA GTCGCATCGG TACGCAGACC
GGCGACGACC ACTACCGGCA GGCACATCCG GACACGGGGG ACAGTGCCAC CCCCGCGGGT
CCAGGCGGTC ACCCGCCTGC CGTCGGCCCC GGAGACGGAT CGGTCTCCCC GAAGCGCCGC
CGGTGGCGAC GACGCCGACG GATCCTCGCG ATCGGCGCGG TGGTCCAGCT CGTGGTGCTC
GTGGCGGGCG ACCGGTTCGC GGTCTCGGCC GCCGAGGACC AGATGGCCAA ACAGATCGAG
GCGAGCGTGA CCGAAAGCCT CGCCTGCGAT GTCATCCCAC CGACCGTGAG CAATGTCAGC
ATCGGCGGAT TCCCGTTTCT CACCCAGATC ATGTTCGGCA ACTTCAAGAA CATCGGATTG
AGCGTCGAGG GAATCTCAAC ACCCGGCCCC CGCATCTCGT CGGTCGAAGC GCATCTCAAA
GGACTTCACA TTCCAGTCAA GAAAATCCTC ACCAACAGCG TTGGTGAGGT TCCGGTCGAC
GATGTTGAAG CAACGGTCCG TCTCGACTAC GACGATGTGA ACACGTTTCT GGCCGACCAG
CCCGGCAAGA TCCAGATCAA CCCGGTGGAC GGCGGAGAGC AGGTCGAGGT CTCCGGCACG
GCCGATGTGC CGGTGCTCGG CGCCCAGGAG ATCGGCGGTG TCACCACCTT CGAGGTGCGG
GACAACAAAC TCACCCTGGT CCCCTCCGAA GTCTCCCTGC GCGGGGGACT CAACTTCAGC
ATCCCCGTGC CCGGTGGCGT GGGGGAGCTG CTCCCCTCGG TCCCGATCCC AGTCGGAGGC
CTGCCGTTTG ACCTCAGCAT CGTCGAAGCG TCAACCGACG CGTCAGGCCT GTCGCTGACC
GCGACAGCCA AGGACGTCGT CCTCCCCAAG GCGGAGGCAC GAACGCGCCA GTGCCCGCCG
GCGGACAACA GCGGGAACTG A
 
Protein sequence
MIGRAGIGRS VPAPGMPAGP EALWKERIQS IPSADPQPAH AAWADSGTHP PTGSRIGTQT 
GDDHYRQAHP DTGDSATPAG PGGHPPAVGP GDGSVSPKRR RWRRRRRILA IGAVVQLVVL
VAGDRFAVSA AEDQMAKQIE ASVTESLACD VIPPTVSNVS IGGFPFLTQI MFGNFKNIGL
SVEGISTPGP RISSVEAHLK GLHIPVKKIL TNSVGEVPVD DVEATVRLDY DDVNTFLADQ
PGKIQINPVD GGEQVEVSGT ADVPVLGAQE IGGVTTFEVR DNKLTLVPSE VSLRGGLNFS
IPVPGGVGEL LPSVPIPVGG LPFDLSIVEA STDASGLSLT ATAKDVVLPK AEARTRQCPP
ADNSGN