| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3694 |
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| Symbol | |
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| ID | 5672060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4372826 |
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| End bp | 4373671 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641242577 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507997 |
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| Protein GI | 158315489 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0437173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACG ACTTCCTCAA CCTGGACGGG CGCATCGTCA TCGTCTCCGG TGCGGGTGGC
GGCGGCATCG GAACCTCGGT GGCGAGCGCC GTGGCGCGCG CCGGGGCGAC CGTGCTCGCG
GTGAGCCGCT CCCAGGAGAA CCTCGACACG CACATCGGGC CGCTGGTGAA GGAGGGGCTG
CCGGTCGTGC CGGTCGCGGC GGACGCCTCG ACCGACGAAG GCATCGCGAC GGTGCTGAAC
GCGGCCTCGC GGACGGACGG CGACCTGTAC GGGCTGGTCA ACGTCGCCGG AGGTGCCGCC
CCTGCGACGT GGATGGCGGC GACCCGGGTG ACCCGGGAGG ACTGGCGCGC GCTGTTCACC
CAGAACCTCG AGACGATGTT CTTCATGAGC CAGGCGGTCG CCGCCGAGCT GAAGTCGCAC
GGCCGTCCCG GGTCGATCGT GTCGGTCTCC TCGATCAGCG GCATGAACAC GGCGCCGTTC
CACATCGCCT ACGGCACGGC CAAGGCGGGG GTGGTGGCGG CGACGCGCAC GCTGGCCGTC
GAGCTCGCCG GGGACAACAT CCGGGTGAAC GCCGTGGCGC CCGGTGTGAC CGCGACCCCG
TCGTCGGGCG CGTATGTGGA CGCCGACGCC GACCGCGACC GCCGCGCCAT CACCATGGGC
CGCCGCGGCC GCCCGGAGGA ACAGGCCGGA GCGATTCTCT TCCTCCTTTC GGACCTGTCC
TCCTACATCA CGGGGCAGAC GATTCTCGTG GACGGCGGCC TGAACCTCAA GTGGACCCAT
CTGGGCGCCG ACAACACGTC GCTGTTCCTG AAGGACGAGG ATTTCCGTGC GTCCCTCACG
CGCTGA
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| Protein sequence | MTNDFLNLDG RIVIVSGAGG GGIGTSVASA VARAGATVLA VSRSQENLDT HIGPLVKEGL
PVVPVAADAS TDEGIATVLN AASRTDGDLY GLVNVAGGAA PATWMAATRV TREDWRALFT
QNLETMFFMS QAVAAELKSH GRPGSIVSVS SISGMNTAPF HIAYGTAKAG VVAATRTLAV
ELAGDNIRVN AVAPGVTATP SSGAYVDADA DRDRRAITMG RRGRPEEQAG AILFLLSDLS
SYITGQTILV DGGLNLKWTH LGADNTSLFL KDEDFRASLT R
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