Gene Franean1_3658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3658 
Symbol 
ID5672024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4335197 
End bp4336045 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content73% 
IMG OID641242541 
ProductNUDIX hydrolase 
Protein accessionYP_001507961 
Protein GI158315453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAAC CGTCCTCGCG GCCTCCCGGC GTTGAACTCC TGGAGGTTCA CCGGCTCCGC 
CTGGTCGAGG CCGCCCCGCC CCGGATGTCG GCCGCGGACC GGCTGGCCAT GGACCAGGTG
TGGGCCGAGG CGGTTGAGGC CAACCCCAGC CTGTTCGACG GACCGGTGGT GGCGTGCGCC
GGACTGGACT GGGACGGGCC GCACAGCCTG GTGCTCACCT GGGCAAGGAC GACCTACCGT
TTTCGCGCCC TGCGTCAGGT CCCGGGTGCG AGCTCGCGGC TGTCATCCCT GTTCGTCAGC
GTCGTGCAGC CGACCGACGA CGGGTGCCTG CTGATAGGGC GGATGGCGTC GTGGACGGCT
GCTCCTGGTC GCTGGCAGCT GCCGGGTGGA TCGGTCGAAC CGCCCGATGA CCTGGAGCCC
CTCGACGTGG CCGCGCTGCG CCGGCATGCC GCTCGGGAAC TGGTCGAGGA GACCGGCATC
GACGTGCCCC TCCGTGCCCT GCCGCTGTGG CTGGTCCTAC GCGGGGAGTG CGGCGACCTC
GGTGTCCTGT TCCTCGCCCC GCGCAGACCG GCGTCCCCAT TGCGCGAACG GTTCGACGCC
CTCGTGTCCT CGGAGACAGC GCTGGGCCGC GATCCCGAAC TGGACCGGAT CGCCCTTGTC
CGCTCCCGCG CCGATCTGGC GGCTCTCGGC GGGCCCTGGG CGGACTACCT GGAGCCGATC
GTCCACCGGT ACGCGGCACC GACGGCCATC GCCCCGCGGT CAGTCGCTCC TGGCCGCGAA
CGGCTGGGGG CGCATCGCGG CGGGGATGTC GGGTTCGGCG TCGAGGACGC GCAGGAGCAG
GCCGAGTAG
 
Protein sequence
MSEPSSRPPG VELLEVHRLR LVEAAPPRMS AADRLAMDQV WAEAVEANPS LFDGPVVACA 
GLDWDGPHSL VLTWARTTYR FRALRQVPGA SSRLSSLFVS VVQPTDDGCL LIGRMASWTA
APGRWQLPGG SVEPPDDLEP LDVAALRRHA ARELVEETGI DVPLRALPLW LVLRGECGDL
GVLFLAPRRP ASPLRERFDA LVSSETALGR DPELDRIALV RSRADLAALG GPWADYLEPI
VHRYAAPTAI APRSVAPGRE RLGAHRGGDV GFGVEDAQEQ AE