Gene Franean1_3639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3639 
Symbol 
ID5672006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4313860 
End bp4314369 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content71% 
IMG OID641242523 
Producthypothetical protein 
Protein accessionYP_001507943 
Protein GI158315435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.563989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.873986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGCAACC CGGGGGTGGT ACCGATCGTC CTCGCCCACG CCCGTGCCCT GCTCACCAGC 
ACCCCCGAGG GCCGCACGTC CTACCTGCAC TCCGACGTGC GCGACATCGA CCACATCCTC
GGCGCCCAGG AACTGAAGGA CACCCTCGAC CTCACCCGGC CGGTCGCGCT GTCCCTCATC
GCGGTCTTCC ACTTCATCCC CGACTCCGAC GACCCGTACG GCATCATCCG GCGTCTCGTC
GACGCGCTGC CGTCCGGCAG CTACGTCGCG CTCACCCATC TGACGGCCGA CTTCGACCCG
GCGATGCTGG CGGTGCAGGA GACCTACCTG AGCCGCGGTG TCCCCATGCA CCTGCGTGAC
CGCGCGCAGG TCGAGCGGTT CTTCGACGGG CTGGAGCTGC TCGAGCCGGG CCTGCAGGTC
GTCCACCGCT GGCGACCGGA CGGCGCGGTG CCCGCCGACC TGACCGACGC CGCGGTCAGC
ATCTACGGCG GCCTCGCCTA CAAGGCGTGA
 
Protein sequence
MCNPGVVPIV LAHARALLTS TPEGRTSYLH SDVRDIDHIL GAQELKDTLD LTRPVALSLI 
AVFHFIPDSD DPYGIIRRLV DALPSGSYVA LTHLTADFDP AMLAVQETYL SRGVPMHLRD
RAQVERFFDG LELLEPGLQV VHRWRPDGAV PADLTDAAVS IYGGLAYKA