Gene Franean1_3628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3628 
Symbol 
ID5671995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4298921 
End bp4299637 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content71% 
IMG OID641242512 
Producthypothetical protein 
Protein accessionYP_001507932 
Protein GI158315424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.794399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCAACC ACGGTACGGG CCGCTCGCCG GGCCCGGTCG TCGTGCTGGA GTACTGCGGG 
CGGCGGTGGC ACGTCGCCCG TGATGAGGAG ATCACCGTCG GGCGCAGCAG CGCCTGTGCC
ATCAAGCTTC CCGACGACAC CTACCTGTCG CGGCACATGG CCTCGCTGCG GGTTCTGGAC
GACTGCGTCC TGGTGTACAA CAAGTCGCAG TCGAAGCCGT TCTGCCTGCG CCCGCCCGCC
GGCGAGGACA GAATCGTCGA GCCCGGGGCG GCGATGACCT CGCTGCCGTT TCCCAGGTTC
GGCATCGTCG CGGCCCGCCG CGGCGGAGCG ACCGTCACCG TGCAGGTCGA CGCCTCCGCC
GTCACCCATG ACCGGCAGTC GCTCGGCCAT ACGACGCTCT CCGAGAGCAG GGCGACCATC
AGCCGGCCGG TCCAGCTCAG CCCCGCACAG CTCGACATCA TCATCGAGCT GTGCCGGCCA
CTGCTGACGA AGTCCGGGTC CGACGCCCGG CCGGCCACCT ACAAGGAGAT CGGCGAGCGG
CTGGGCCGCG GCCCGAACTA CGTGCGCAAC GTCATCTCGG ACGTCCGCCG CGAGCTGAGT
GACCGCGACG AGCCCGGCCT GGCCGACTGG GAGGACCTGG CCCGCTGGAT GATCCTCAAC
CGCCTGATCA CCGAGCGGGA CGTCCGGAGG TCCCGGCGAC CAGGCGCCGG GGTGTAG
 
Protein sequence
MGNHGTGRSP GPVVVLEYCG RRWHVARDEE ITVGRSSACA IKLPDDTYLS RHMASLRVLD 
DCVLVYNKSQ SKPFCLRPPA GEDRIVEPGA AMTSLPFPRF GIVAARRGGA TVTVQVDASA
VTHDRQSLGH TTLSESRATI SRPVQLSPAQ LDIIIELCRP LLTKSGSDAR PATYKEIGER
LGRGPNYVRN VISDVRRELS DRDEPGLADW EDLARWMILN RLITERDVRR SRRPGAGV