Gene Franean1_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3548 
Symbol 
ID5675716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4207446 
End bp4208645 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content71% 
IMG OID641242434 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001507854 
Protein GI158315346 
COG category[R] General function prediction only 
COG ID[COG4552] Predicted acetyltransferase involved in intracellular survival and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC TCGGCCAGCG CGTCGCGTCG CGGTCCGCGC CGCGGGTCGC GCCGTCCAGG 
CGCCTTGCGC GATCTAGCCG AGTCGTCGAC ATTCGGGACA TGAATCTGGT GGTCGACGTC
GTGCTGGAGG CTGGTCTGCG CTACACGGAG ACGATCGAGT CGGGTGCGGG CGGCCGGTCC
GTGCGTTACT GCCGGCTCGT GGCGGACCAG GACACGCCCG TCGGCGAGCT GGAGGTGCAT
TCCTTCCGGT GGCGGTTCGG TGCCGTGGCC CTCGACGCCG AGGGTATCGG CGGGGTGGAG
GTCCAACCGT CTTTCCGGCG CCGTGGACAC ATGGGCCGGC TTCTCCGCCA GGCGTTGGAC
GGCATGTCAC GGCGGGTGAA CGTCGCCACG GTCTCCGACG GCATCCAGGG CGTGTACGAG
AAGTTCGGCT TCGCCACGTG CGTTGCCGAG GGTCATCTGG ACGTTCGCGT TCGCGACGTC
GAACGCGCCG CTGCCGCCGC TGTGCCGGAC GGTGCGCGCG TCCGACCCGG CTCGGCTGGA
GACCTCCCAG CGATGGTGGA CCTCTACAAC GCCACGCACG CCCATCGTCC GTGGACCCAC
GAACGTCCCG CGGACTGGAA CCGTCTGGTG CCCCAGACGA CATGGCGAGC GGGCTCGGAG
ATCCTCGTCG TGGAGGCCGG GGGGACGCTC GCGGGATACG CGATCGTGGC GGGCCGGTCG
TTCGGTGACG GCTACTTCGG GCTGGCTGTC GAGGAGATGG CGGCCCGCGA CGCCGGCGTT
GCCCTGTGCC TGCTCGCCGA CGTTGCCAGG TCCGCATGGG AGTTGCGGGT CAGCGAGTTT
CGGGTGCGGG AGCCGTTGGA CGGCGTCGTC GGGCGGCTCG CGCGTCACCT GGGCTGCGCC
TACCACCAGG AGTTCCCGCC GACCGGCGGG ATGATGGCGG CGATCCTGAA CCGATCCGAG
CTGCTGGCCA CGCTCGAGCC GGAACTTCGG CGCCGGGACC GCGGTGCCGG CGCCGTCGAC
GAACATGCGC GGCCTGGTTT CCAGGCGGCG CCACAGCGGA GCTCCTGGCG CCCTACGCGC
ACGCGCTGGA CCGGTACTGA ATCGCCATCG GGCGCCGCAC GCGCCTGGCC AACTACAACG
ACGGTCATCG CTCCGACCAC ATCGGGCGCC AGGGCTTCGG CCCCGGGGCG GGCGCGGTAG
 
Protein sequence
MTDLGQRVAS RSAPRVAPSR RLARSSRVVD IRDMNLVVDV VLEAGLRYTE TIESGAGGRS 
VRYCRLVADQ DTPVGELEVH SFRWRFGAVA LDAEGIGGVE VQPSFRRRGH MGRLLRQALD
GMSRRVNVAT VSDGIQGVYE KFGFATCVAE GHLDVRVRDV ERAAAAAVPD GARVRPGSAG
DLPAMVDLYN ATHAHRPWTH ERPADWNRLV PQTTWRAGSE ILVVEAGGTL AGYAIVAGRS
FGDGYFGLAV EEMAARDAGV ALCLLADVAR SAWELRVSEF RVREPLDGVV GRLARHLGCA
YHQEFPPTGG MMAAILNRSE LLATLEPELR RRDRGAGAVD EHARPGFQAA PQRSSWRPTR
TRWTGTESPS GAARAWPTTT TVIAPTTSGA RASAPGRAR