| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3517 |
|---|
| Symbol | |
|---|
| ID | 5671887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 4178365 |
|---|
| End bp | 4178934 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641242404 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001507824 |
|---|
| Protein GI | 158315316 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.762762 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACGG TGCCCCGGCA CCTGTTCGTG CCCGACGCCG CGCCCAGCGA GGCGTACGCG
GAGCAGGCGG TCATCACCAA GCGCGCCCCT GACGGGGCAG CTTTGAGCTG TGCTTCCGCA
CCGGAGGTTG TGGCGATGCT GCTGGAGCAG CTCATCCTGT CCGGCGTGGA GATCGGACCC
TACGATCCGT TCGACGGGAT CTGGCTGCGC CTGACCGCCA CCGAGCCCGG CTGCTGCCGC
ATCGCGGCCA CCCCTGAGGC CGTTGGCTCA ATGCTGTGCG CACCCGCGAT CGCCCAGCGC
AGCCCCGCCC TCGCCGAAGA GGACTCGCTC GCCGACCTCA GCCTGGCCCG CAACCACGCG
GGACCCGGCC GGCACGTGCT CAGCGCGACC GGACACGGAC CGGGCCGCCA CGACCTCACC
GACAGGCTGA TCACCGCGAT TCACACCTGG GACGGCGACC GCACGGCAAT CCCGGTCGTG
ACGGCTTACC GCGGACTCAC CGGCGCCCCG CACCACCAGC CGTCCGAACT GATCCTGAAG
CCGGACAGCC CACTGAAGAT CGCCTTCTGA
|
|---|
| Protein sequence | MRTVPRHLFV PDAAPSEAYA EQAVITKRAP DGAALSCASA PEVVAMLLEQ LILSGVEIGP
YDPFDGIWLR LTATEPGCCR IAATPEAVGS MLCAPAIAQR SPALAEEDSL ADLSLARNHA
GPGRHVLSAT GHGPGRHDLT DRLITAIHTW DGDRTAIPVV TAYRGLTGAP HHQPSELILK
PDSPLKIAF
|
|---|
| |