| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3464 |
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| Symbol | |
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| ID | 5671835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4093947 |
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| End bp | 4095536 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641242352 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001507772 |
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| Protein GI | 158315264 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.739249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGCG GACGCCCGCC AAGACCCCTC CGATCATTCT GGTCCGCCCG GCGGTTGCGG
ACCGCGGCGG CGGCCGCGCT GGCCGCGCTG GCGGTCAGCA CGGTCGCCGC CTGCGGCGGT
TCCACCGCCG CCGACGGGAC CGCGCCGGCG GCGCAGGGCG GGACCCTCAC CGTCCTGTGG
CCCGCCGAAC CACTCGACCT GTCCACCGAC AGCGGCTTCG GACTACAGAT GATCTCCGGA
TCGATCGAGC GCCTCGCCGT GTACGACGCC CTGGTCGCGA TCACCCCGGC CGCCGAGCTG
GACTACCGCC TGGCCACCTC CCTCGACTCC GACGACTCGC TGACCTGGAC GCTGCGGCTG
CGCGAGGGGC TGCGGTTCAG CGACGGCACC CCGCTGGACG CCGCCGCGGT CCGGGACAAC
TGGACCCTGC TGGCCGATCC GGCCCGCAAG TCACCCAGCG CCAAGATCGC ACAGCGGATC
GGGTCATTCA CCATCGTGGA CCCGACAACC CTGCGGATCA CGCTGAAGGA GGCCGACGGC
CAGTTCCCCC GGCTGGTCGC GCAGACCCCG CTGACCTTCA TCGGCTCCCC CACCGCGCTG
CGCGCCAAGG GCGACGGGTT CAAGACCGCG CCGGTCGGCG CCGGGGCCTT CACCGTCCGG
GAGTGGCTGC GCAACGACCA CCTGACTCTG GTCCGCAACC CGACCTCGTC GGTCCAGGCG
CACTACGACA CGATCGTCGT CAAGTCCGTC CCGGACGAGA CGCAGCGCTA CAACACCCTG
CTCGCGGGGG GCGCGGACAT CGCCTTCTCC GCGAACCTGC GCACCGGCAT CACCGCGGTC
GCGGCCGGGC TGGTCACCGA GAAGGCGTTC AGCGACGGCG GGCTCAACCT GCTGTTCAAC
ATCACCAAGG CCCCCTTCGA CGACATCCGG GCCCGCCGGG CGGTCTCCTA CGCCCTCGAC
GCGCAGGCGC TGAACAAGGC CCTGTTCGAC GGGACCGCCG CCGTGCCGTC CAGCTTCCTG
CGCGACGACT CGCCGCTGCA CAGCGACGTG CCGCTGCCCC GCCCGGACCG GGCGAAGGCC
CAGGCCCTGT TCGACGAGCT CGCCGCCGCG GGCAAGCCGG TGCAGTTCAC CATCATCTCG
CCGCTGAACT TCAGCAACGT CGCCGAATGG GTGCAGTCCA GCCTCGGTGG CTTCCGGAAC
GTCAGCGTGA AGGTCGACGC GATGGCCCAG ACGCTGCCCG TGCTCCAGGG CGGCTTCCAG
GCCACGCTCA CCGGCACCCC GCGGTTCGTG GACCCCTACC CGCAGCTGGC CCTGAACCTG
GGCACCGGCG GCCCGAGCAA CTACGGCAAG TTCTCCGACC CGGCCCTCGA CGCCGCGCTG
CGGGAGGGGC AGCAGTCCCG GGACACGGCC GTCCGGGTCC GGGCCTACGA GACCGCGCAG
CGGATCATCG CCGAACAGCT GCCGCTGGCC GGCCCGCTGT ACCGCCTGCC GGGCCAGTAC
CTACACGCGT CCACGGCCTT CGGTACGGGC AAGCTCCCGA TCATCAACGA CGGCGTGCTC
GACATCACCC GGCTCACCGG GGCGGGGTGA
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| Protein sequence | MRRGRPPRPL RSFWSARRLR TAAAAALAAL AVSTVAACGG STAADGTAPA AQGGTLTVLW
PAEPLDLSTD SGFGLQMISG SIERLAVYDA LVAITPAAEL DYRLATSLDS DDSLTWTLRL
REGLRFSDGT PLDAAAVRDN WTLLADPARK SPSAKIAQRI GSFTIVDPTT LRITLKEADG
QFPRLVAQTP LTFIGSPTAL RAKGDGFKTA PVGAGAFTVR EWLRNDHLTL VRNPTSSVQA
HYDTIVVKSV PDETQRYNTL LAGGADIAFS ANLRTGITAV AAGLVTEKAF SDGGLNLLFN
ITKAPFDDIR ARRAVSYALD AQALNKALFD GTAAVPSSFL RDDSPLHSDV PLPRPDRAKA
QALFDELAAA GKPVQFTIIS PLNFSNVAEW VQSSLGGFRN VSVKVDAMAQ TLPVLQGGFQ
ATLTGTPRFV DPYPQLALNL GTGGPSNYGK FSDPALDAAL REGQQSRDTA VRVRAYETAQ
RIIAEQLPLA GPLYRLPGQY LHASTAFGTG KLPIINDGVL DITRLTGAG
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