Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3461 |
Symbol | |
ID | 5671832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 4090918 |
End bp | 4092078 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641242349 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001507769 |
Protein GI | 158315261 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.414983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCG ACACCGCGGG AGCTCCCAGC GCCCCGGGCA CCACAGGCGT ACTCGGCGCC GCGGGCCCGG CCGGCCCGCT GCTGACCGCG CGGGACGTCA CCACCACGCT GCCGGTGCCG GCCGGCCGGC TGCGTGCCGT CGACGGGGTC TCCTTCGCGC TCGCCCCCGG TGAGGCCCTC GGCATCGTGG GCGAGTCCGG GTCGGGCAAG TCGATGCTGG CCCGCACGCT GATGGGCCTG GCCCCGCCGA CCGCCCGCAC AACCGGCTCG GTGTGGTTCG CCGGCCGCGA CCTGCTCACC GCCGGCCCCG AGGAACTGCG GGAGGTGCTC GGCTCCGGCA TCGCGATGGT GTTCCAGGAC TCGGCGACGT CCCTGAACCC CGTGACTCGG GTCGGGTGGC AGCTCACCGA GACGCTGCGG CTGCGCCGTG GAATGGACCG CCGTCCCGCG CGCGAGGAGG CCGTCGATCT GCTCCGCCGG GTCGGCATAC CCGACCCCGA ACGGCGCGCC CGCAGCTACC CGCACGAGCT GTCCGGCGGG ATGCGCCAGC GGGCCTGCAT CGCGCTCGCC ATCGCCTGCG GACCGCGGGT GCTGCTGGCC GACGAGCCGA CCACCGCCCT GGACGTCACC GTCCAGCGCC AGATCCTCGA TCTGCTCGCC AGCCTGCGGC GCGGTGCGGG CATGGGGCTG GTCCTCATCA CCCACGACCT CGCGCTCGTG GCCGGTCGGA CCGAACGGCT CCTGGTGATG TACGCGGGAC GGGTCGTGGA GACCGGGCCT ACGCGGGCGG TCATCCGTGC GCCGCACCAC CCCTACACCG CCGCGCTGCT CGCCTCGATC CCCCGCCTGG ACCAGCCGGG CCACAGCCGG CTGGCCACGA TCCCCGGCCG GCCCGCCGCG GCACTGGACC CTCGCCCCGG CTGCCGGTTC GCGCCGCGAT GCCCCCGGGC ACAGCCGCGC TGCCGGCGGG AGGACCCCGT CCTCGGGCCC GTCACCGATC CCGGCATCGC TGCCACCGCC ACCGCCCCCG GTATCGCTGC CGCCGGCATC GCTGCCGGGA TCGGGACCGT CGCGAGGCCC GGCGAGCACC ACACGGTCGC CTGCTTCCAT CCCCACGACA GCCCGCCGCC CGGCCCGGAC GTCCCGCAGG AGCCACGTTG A
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Protein sequence | MTIDTAGAPS APGTTGVLGA AGPAGPLLTA RDVTTTLPVP AGRLRAVDGV SFALAPGEAL GIVGESGSGK SMLARTLMGL APPTARTTGS VWFAGRDLLT AGPEELREVL GSGIAMVFQD SATSLNPVTR VGWQLTETLR LRRGMDRRPA REEAVDLLRR VGIPDPERRA RSYPHELSGG MRQRACIALA IACGPRVLLA DEPTTALDVT VQRQILDLLA SLRRGAGMGL VLITHDLALV AGRTERLLVM YAGRVVETGP TRAVIRAPHH PYTAALLASI PRLDQPGHSR LATIPGRPAA ALDPRPGCRF APRCPRAQPR CRREDPVLGP VTDPGIAATA TAPGIAAAGI AAGIGTVARP GEHHTVACFH PHDSPPPGPD VPQEPR
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