Gene Franean1_3420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3420 
Symbol 
ID5671791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4049877 
End bp4050305 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content72% 
IMG OID641242308 
Producthypothetical protein 
Protein accessionYP_001507728 
Protein GI158315220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.422706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCCGG ACTTCACCTT ACCTTCTTCT CTCGCGGTCC TTCTCGCGGG TTTCCGGCCG 
TGTTTCACCG CGCCGACGTT CGAGGTGTTC CGCGCCCTGG TCGGCGGCAC GCTCGCCCAG
ACCGGCCGGC GCACGGTCTG CGGGATGCTC GTAGGCGCGG GGCTCTCACG GGTGTGGCCG
CACGACCGGG CGCACCGGTT CTTCTCCGCC GCCCGCTGGT GCCCGGACCA GGTCGGCCTG
GCACTGGCCC GCCTGGTCGT GCGCCTGCTC GTCGGCGACG GCCAGCCGGT CCTCGTCGCG
GTCGACGACA CCCGCCAGGG TCCACCGCTG ATCGGTCCAG CCATACACCC CCGGCCCCCG
ACGCAGGATC GCCTCCAACC GGGCCAGATC CCGATCATCC AACCGGCACG AGGACACCGG
ACCGGTTGA
 
Protein sequence
MLPDFTLPSS LAVLLAGFRP CFTAPTFEVF RALVGGTLAQ TGRRTVCGML VGAGLSRVWP 
HDRAHRFFSA ARWCPDQVGL ALARLVVRLL VGDGQPVLVA VDDTRQGPPL IGPAIHPRPP
TQDRLQPGQI PIIQPARGHR TG