Gene Franean1_3326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3326 
Symbol 
ID5671698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3939046 
End bp3940236 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content72% 
IMG OID641242215 
Productradical SAM domain-containing protein 
Protein accessionYP_001507635 
Protein GI158315127 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.579785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACAC CGCTGCCACT GGTCGAGCAG TTCCAGTACG GCCTGGACGC GCCGATCTGC 
CTGACCTGGG AGCTGACCTA CGCCTGCAAC CTGGCCTGCG TGCACTGCCT GTCCAGCTCG
GGCCGGCGTG ATCCGCGCGA GCTGTCCACC GCCGAGTGCA AGGCCGTGAT CGACGAGCTC
GAGCGGATGC AGGTGTTCTA CGTCAACATC GGTGGCGGCG AGCCGACCGT CCGGTCGGAC
TTCTGGGAGC TCGTCGACTA CGCCACCGCC CACCACGTGG GGGTCAAGTT CTCCACCAAC
GGAGTCAGGA TCACCCCCGA GGTGGCGGCG CGGCTGGCCG CCAGCGACTA CGTCGACGTG
CAGATCTCGC TCGACGGCGC GACCGAGGCC GTCAACGACG CGGTGCGCGG GCCCGGCTCG
TACCAGACGG CGATGCGCGC CATGGCAAAC CTGGCCGCCG CCGGGTTCCG CGGGTTCAAA
CTGTCGGTCG TGGTGACCCG GCACAACGCC GGCCAGCTCG ACGAGTTCAA GGCGATAGCC
GACCGGTTCG GCGCGCAGCT GCGGCTGACC CGGCTGCGGC CGTCCGGCCG GGGCGCCGAC
GTCTGGGACG AGCTGCACCC GACGGCCGCC CAGCAGCGGG AGCTCTACGA CTGGCTGGTG
GCGCACGGCG AGCGGGTCCT CACCGGGGAT TCGTTCTTCC ACCTGGCCGC CTACGGCGAC
GCGCTGCCCG GGCTCAACCT GTGCGGCGCC GGGCGGGTGG TGTGCCTCAT CGACCCGGTC
GGTGACGTCT ACGCCTGCCC GTTCGCCATC CACGACAGCT TCCGCGCCGG CAACGTCCGC
GGCGAGGGCG GGTTCACCGG GGTCTGGCGG ACCTCGGAGC TGTTCGCAGA CCTGCGCCAG
CCGCAGACCG GCGGGGCCTG CACATCGTGC TCGGCGTTCG ACGCCTGCCG GGGCGGGTGC
ATGGCGGCGA AGTTCTTCAC CGGCCTGCCG CTGGACGGCC CCGACCCGGA ATGCGTGAAG
GGCCACGGCG CGGCCGCGCT GGCCGCGGTG GACCTCGAGC TGGTGCCGAA GCCGTCGCTG
GACCACTCCC GCCCGGCGTC CCGCCGGTCG GGCCCTGTCC CGGTGACAAT CGGCGCGCGC
CCACCCGACC GCGCTTGTGA GGAGAGCCCG CTGGCCGGGC TGAGGCTCTG A
 
Protein sequence
MSTPLPLVEQ FQYGLDAPIC LTWELTYACN LACVHCLSSS GRRDPRELST AECKAVIDEL 
ERMQVFYVNI GGGEPTVRSD FWELVDYATA HHVGVKFSTN GVRITPEVAA RLAASDYVDV
QISLDGATEA VNDAVRGPGS YQTAMRAMAN LAAAGFRGFK LSVVVTRHNA GQLDEFKAIA
DRFGAQLRLT RLRPSGRGAD VWDELHPTAA QQRELYDWLV AHGERVLTGD SFFHLAAYGD
ALPGLNLCGA GRVVCLIDPV GDVYACPFAI HDSFRAGNVR GEGGFTGVWR TSELFADLRQ
PQTGGACTSC SAFDACRGGC MAAKFFTGLP LDGPDPECVK GHGAAALAAV DLELVPKPSL
DHSRPASRRS GPVPVTIGAR PPDRACEESP LAGLRL