Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3326 |
Symbol | |
ID | 5671698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3939046 |
End bp | 3940236 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641242215 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001507635 |
Protein GI | 158315127 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.579785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCACAC CGCTGCCACT GGTCGAGCAG TTCCAGTACG GCCTGGACGC GCCGATCTGC CTGACCTGGG AGCTGACCTA CGCCTGCAAC CTGGCCTGCG TGCACTGCCT GTCCAGCTCG GGCCGGCGTG ATCCGCGCGA GCTGTCCACC GCCGAGTGCA AGGCCGTGAT CGACGAGCTC GAGCGGATGC AGGTGTTCTA CGTCAACATC GGTGGCGGCG AGCCGACCGT CCGGTCGGAC TTCTGGGAGC TCGTCGACTA CGCCACCGCC CACCACGTGG GGGTCAAGTT CTCCACCAAC GGAGTCAGGA TCACCCCCGA GGTGGCGGCG CGGCTGGCCG CCAGCGACTA CGTCGACGTG CAGATCTCGC TCGACGGCGC GACCGAGGCC GTCAACGACG CGGTGCGCGG GCCCGGCTCG TACCAGACGG CGATGCGCGC CATGGCAAAC CTGGCCGCCG CCGGGTTCCG CGGGTTCAAA CTGTCGGTCG TGGTGACCCG GCACAACGCC GGCCAGCTCG ACGAGTTCAA GGCGATAGCC GACCGGTTCG GCGCGCAGCT GCGGCTGACC CGGCTGCGGC CGTCCGGCCG GGGCGCCGAC GTCTGGGACG AGCTGCACCC GACGGCCGCC CAGCAGCGGG AGCTCTACGA CTGGCTGGTG GCGCACGGCG AGCGGGTCCT CACCGGGGAT TCGTTCTTCC ACCTGGCCGC CTACGGCGAC GCGCTGCCCG GGCTCAACCT GTGCGGCGCC GGGCGGGTGG TGTGCCTCAT CGACCCGGTC GGTGACGTCT ACGCCTGCCC GTTCGCCATC CACGACAGCT TCCGCGCCGG CAACGTCCGC GGCGAGGGCG GGTTCACCGG GGTCTGGCGG ACCTCGGAGC TGTTCGCAGA CCTGCGCCAG CCGCAGACCG GCGGGGCCTG CACATCGTGC TCGGCGTTCG ACGCCTGCCG GGGCGGGTGC ATGGCGGCGA AGTTCTTCAC CGGCCTGCCG CTGGACGGCC CCGACCCGGA ATGCGTGAAG GGCCACGGCG CGGCCGCGCT GGCCGCGGTG GACCTCGAGC TGGTGCCGAA GCCGTCGCTG GACCACTCCC GCCCGGCGTC CCGCCGGTCG GGCCCTGTCC CGGTGACAAT CGGCGCGCGC CCACCCGACC GCGCTTGTGA GGAGAGCCCG CTGGCCGGGC TGAGGCTCTG A
|
Protein sequence | MSTPLPLVEQ FQYGLDAPIC LTWELTYACN LACVHCLSSS GRRDPRELST AECKAVIDEL ERMQVFYVNI GGGEPTVRSD FWELVDYATA HHVGVKFSTN GVRITPEVAA RLAASDYVDV QISLDGATEA VNDAVRGPGS YQTAMRAMAN LAAAGFRGFK LSVVVTRHNA GQLDEFKAIA DRFGAQLRLT RLRPSGRGAD VWDELHPTAA QQRELYDWLV AHGERVLTGD SFFHLAAYGD ALPGLNLCGA GRVVCLIDPV GDVYACPFAI HDSFRAGNVR GEGGFTGVWR TSELFADLRQ PQTGGACTSC SAFDACRGGC MAAKFFTGLP LDGPDPECVK GHGAAALAAV DLELVPKPSL DHSRPASRRS GPVPVTIGAR PPDRACEESP LAGLRL
|
| |