| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3270 |
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| Symbol | |
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| ID | 5671644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3872751 |
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| End bp | 3874409 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641242162 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001507582 |
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| Protein GI | 158315074 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTAGAT TCCACGGTGC CATCGGCGCC GCGCCAGACC CGTGGCGTTC GACCAGTTCG
GGCCGTATGC CACGGCTGTT TCTGTGTGCC GTTGTCGCCG CCTTGGTGCT GCTGGGGCTG
GATGTCGCCT TCGCTGTGCT ACTGGACCCG CGACCCAGCC GAATCGGTAC AACTTTCGTC
GACACTGCCA CCGAGCTCGC TGCCGCGGCT GCCTGTTTCT GGACCGCTCG GCGGATGCGC
GGGGCGGAGC GTCGCTGGCG GCGGCTGATC GGCTTCGCGG CCAGCGGTGC GATGCTCACT
GGCCTTGGGA CGGCGGCGAT GTTACTGGCC ACTGGCTCGG TTGGCCCGCC GCCGGTCTAT
GCTGTCCTCA TCCCGTGCTA CGGGCTGGCG CTGGCCGGGC TGCTCTCCCT GCCCACCGAC
CCGCTGGACG GCCGGGGCGG GAGCGCCGAG ACGGTGCGGC ACGGCGGGCT CCGTTGGTGC
GCGATCACCA TGCTGGATTG CCTGCTGCTC GTCGGTTCGA TCATCCTGCT GGAGTGGGTG
ACAGTGCTCA CCGCGCTCGT CCACGCGGGC GGGCACGACC CCGTACACTT CCTGTTCTCC
CTGGTCCACG CGGTCGCCGG TCTGATCCTG GCTACGGCGG TGCTGCTGAT CGCAAGCTTC
CGCCGGCCGC GCTCCCGCGG GACGTTGGCG TTACTTGGCA CCGGCCTGCT GACCTACGGG
CTCACCAACA ACATCCTCGT CTACCACACC GCGCAGGGCA GGATCTCCCT TCCACCGTGG
AGCCTGATCG GGTTTGCTCT GGCCTGGCTG CTGATACTCC TCGCCGCGCT CGTCCCGGTC
CCGGCTCACC CGCAGGCCGA CGGCCCGACG CCGGTTAGCC AGCGGGTACT GTGGGCGCAC
GCCCTGCTGC CCTACGTCGT GCTCGGCGCG GTAAGCCTGC TGGTGCTGGG CAAACTGACC
ACCGGGACGC GGCTCGACCG GTTCGAGACA TACGGCATGC TCGGCCTGCT GCTGGTGACG
CTTGTCCGGC AGATGGTCAC CTTGGCTGAG AACACCCGGC TGCTGGCTGC GGTGCGGGAA
CGGGAACAGC AGCTGCATTA CCAGGCGTTC CACGACCAGC TGACCGGCCT GCCGAACCGG
GCGTTGTTCG CCCGACGGCT AGAACAGGCA CTCGCACACA ACCCCGACAC CGACGACGTC
AGTGTCGGCA CCCCGCTGTC GGTGATGTTC CTGGATCTCG ACGAGTTCAA GGGGGTGAAC
GACGCATTCG GGCACGCCGC CGGGGATGAA CTCCTCAAGA TCAGCGCAGA GCGGTTGCGG
GCGGGGACGC GCGCCGCGGA CACCGTAGCT CGGCTCGGCG GTGACGAGTT CGCCGTCATC
CTCGACGGCG GCGGACCAGA CAATCCCCGC CAGATCGGCG AGCGGCTCGC CGCGGCAATC
CAGACCCCCT GCGTGCTCGC CGGACGGCCT TATACCCCGC GAGCCAGCCT TGGCCTGGTC
ATCCTGGACG GCTCCGCGGC TCAGCCGCCC GGTCCCGACA CCCTGCTGAA CCAGGCCGAC
CGGGCGATGT ACACAGCCAA GCGGGAACGG GCCGGCAGAC TGGTGATCTA CCGGCCAGAC
CTTGCCCCCA CCGGCCACCA CCGAACGACA CGAATGTGA
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| Protein sequence | MSRFHGAIGA APDPWRSTSS GRMPRLFLCA VVAALVLLGL DVAFAVLLDP RPSRIGTTFV
DTATELAAAA ACFWTARRMR GAERRWRRLI GFAASGAMLT GLGTAAMLLA TGSVGPPPVY
AVLIPCYGLA LAGLLSLPTD PLDGRGGSAE TVRHGGLRWC AITMLDCLLL VGSIILLEWV
TVLTALVHAG GHDPVHFLFS LVHAVAGLIL ATAVLLIASF RRPRSRGTLA LLGTGLLTYG
LTNNILVYHT AQGRISLPPW SLIGFALAWL LILLAALVPV PAHPQADGPT PVSQRVLWAH
ALLPYVVLGA VSLLVLGKLT TGTRLDRFET YGMLGLLLVT LVRQMVTLAE NTRLLAAVRE
REQQLHYQAF HDQLTGLPNR ALFARRLEQA LAHNPDTDDV SVGTPLSVMF LDLDEFKGVN
DAFGHAAGDE LLKISAERLR AGTRAADTVA RLGGDEFAVI LDGGGPDNPR QIGERLAAAI
QTPCVLAGRP YTPRASLGLV ILDGSAAQPP GPDTLLNQAD RAMYTAKRER AGRLVIYRPD
LAPTGHHRTT RM
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