| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3122 |
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| Symbol | |
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| ID | 5671500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3677186 |
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| End bp | 3678751 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641242019 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_001507439 |
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| Protein GI | 158314931 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.680526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGCG GGCCGCTGAG TCAAATGGCG CAGCCCACGG TATTATTCGA AAGGAACACC
TCATTGTCCG ACGTCACCAT CAGACACTGG GTTGATGGCC AGCCGTTCAA CGGCACCGGC
ACACGATGGG CCGAGGTCAC CAATCCGGCC ACGGGCCACG TGACCGGCCG AGTGGCACTC
GCGTCGAGCA AGGACGCCGA TCACGTCATC GCAGTGGCGG CGCGAGCCGC CGGGTCGTGG
AGTCGTACCT CCCTGGCCCA GCGCACACGG ATCCTGTTCG CCTTCCGTGA GCTGCTCGAC
TCCCGCCGGG ACGAACTCGC CGCCATCATC ACGGCGGAGC ATGGCAAGCT GCCCTCGGAC
GCCCTCGGGG AGATCGCCCG TGGTCAGGAG GTCGTCGAGT TCGCCTGCGG CGTGTCGCAC
CTACTCAAGG GCGGGCACTC CGAGTCCGTC TCGACCGGTG TCGACGTCCA TTCCAAGCGT
GACCCCCTGG GCGTCGTCGG CATCATCTCG CCGTTCAACT TCCCCGCCAT GGTGCCGATG
TGGTTCTTCC CACTCGCCAT CGCCACCGGC AACACAGTCG TCCTGAAGCC AAGTGAGAAG
GACCCGACGG CCGCGCTCTG GATCGCCGAC CTCTGGAAGC AAGCCGGATT ACCGGACGGG
ATCTTCAACG TGCTGCAGGG GGACAAGGAG GCTGTCGACG CGCTCATCGA GAGCCCGGTC
GTGCAGTCCA TTAGCTTCGT TGGGTCCACC CCCGTCGCCC AGTACGTCTA CGAGGCATCA
TCTAGGCACG GCAAGCGCGT GCAGGCGCTC GGCGGTGCTA AGAACCACAT GATCGTCCTT
CCTGACGCAG ATCTCGACTT GGCGGCCGAC GCCGCGGTGA ACGCGGGTTA CGGCAGCGCC
GGCCAGCGCT GCATGGCCGT TAGCGTCCTC GTGGCCGTGG GCGAGATCGC CGACGACCTC
GTGGCCAGGA TCGCCGATCG GACGAGGACA CTGGTCGTCG GCGACGGCGC CGAAGCCGAC
ATGGGGCCGC TGATCACCCG CGCTCACCGT GACCGGGTCG CCTCCTTCGT CGACGCCGGC
GAGCAGGACG GGGCAGCTAT CGAGGTCGAC GGCAGGGATG TGCAAAAGGG CGGCATCCAG
GATGGGTTCT GGCTCGGTCC TACGCTGTTG GATCACGTCA CACCTGCCAT GAAAGTCTAC
CAGGAGGAGA TCTTCGGCCC CGTCCTCTGC GTCGTCCGAG TAAACACGTA CGACGAGGCT
GTTGTGCTGG TCAATGGGAA TCCCTACGGC AACGGGGCAG CATTGTTCAC CAACGACGGC
GGTGCCGCGC GGCGCTTCGA GGCAGACGTG CAGGTCGGGA TGATCGGAGT GAACATCCCT
GTCCCGGTTC CCGTCGCCTA CTACTCCTTC GGAGGGTGGA AACAGTCGCT GATGGGAGAC
ACCCACGCAC ACGGAACAGA GGGGGTCCAG TTCTTCACCC GCGGCAAGGT GGTGACCACG
CGGTGGATCG ATCCGGCGAA CAGGCCACAG GGCGGGCTGG AGCTCGGCTT CCCGCGCAAT
GTGTGA
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| Protein sequence | MAGGPLSQMA QPTVLFERNT SLSDVTIRHW VDGQPFNGTG TRWAEVTNPA TGHVTGRVAL
ASSKDADHVI AVAARAAGSW SRTSLAQRTR ILFAFRELLD SRRDELAAII TAEHGKLPSD
ALGEIARGQE VVEFACGVSH LLKGGHSESV STGVDVHSKR DPLGVVGIIS PFNFPAMVPM
WFFPLAIATG NTVVLKPSEK DPTAALWIAD LWKQAGLPDG IFNVLQGDKE AVDALIESPV
VQSISFVGST PVAQYVYEAS SRHGKRVQAL GGAKNHMIVL PDADLDLAAD AAVNAGYGSA
GQRCMAVSVL VAVGEIADDL VARIADRTRT LVVGDGAEAD MGPLITRAHR DRVASFVDAG
EQDGAAIEVD GRDVQKGGIQ DGFWLGPTLL DHVTPAMKVY QEEIFGPVLC VVRVNTYDEA
VVLVNGNPYG NGAALFTNDG GAARRFEADV QVGMIGVNIP VPVPVAYYSF GGWKQSLMGD
THAHGTEGVQ FFTRGKVVTT RWIDPANRPQ GGLELGFPRN V
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