Gene Franean1_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3106 
Symbol 
ID5671485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3664383 
End bp3665069 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content71% 
IMG OID641242004 
Producthypothetical protein 
Protein accessionYP_001507424 
Protein GI158314916 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGGG CCGGTGGCTG TTCCACCACG GGGTGCGTCG CCTGGCGAAG GGGTCGGGTA 
AGTCGCCGTT CGCCGCGGTG CCGGGCTGAT CGAGACAACG GCGGTGTGGA GCTCGCCTCC
ACCATCCAGG ACAACCTCGC GAAGTCCGGC TCGCGGATGC TGGAAACGTC GAACGCCTGG
GTGCCTGGTG TCGACTCGGT GGCCGAGGGC ACGTGGGATG CGTGGCTGGG CCAGGAGGAG
GGGCGCAGCC GGGCGGAGAC GCGGATCCTC TACGACGCGC GGATCGCCCC GGCCGACACC
CGCCTCGACG ACGAGGCGTC GCTGGCGGCC GCGCTCGAGC ACGTCTACGC CGACTGCCCC
TGGCAGGACC TGCGGCCGAT CATCAACCGG ATCTGGTCGC TGAACGCCCG CCCGGATGAG
TCGAAGCGGA AGTACCTCAA CCGGCCCACC GCCGCCGAGG ATGCCTGGAC CACGCCATCG
CCCAGGCGAA CGGACTACCT GTGCCGTGAG CGGAGACGGC GCTTGCTCAG TCCTGCCGGC
CCTTGGGGGT CGGGTCCGCT GCCCACCACT GGTGGTCGAA CCGGGCAGGC ATGCCTGGTT
CCCGGACGGT TCTCCCGGCC GAGCATGAGG CGGGGGCTCT CGCGTACTAC GGGCGGATGC
GGGGACGTGC AACCCCGACA GGACTGA
 
Protein sequence
MTRAGGCSTT GCVAWRRGRV SRRSPRCRAD RDNGGVELAS TIQDNLAKSG SRMLETSNAW 
VPGVDSVAEG TWDAWLGQEE GRSRAETRIL YDARIAPADT RLDDEASLAA ALEHVYADCP
WQDLRPIINR IWSLNARPDE SKRKYLNRPT AAEDAWTTPS PRRTDYLCRE RRRRLLSPAG
PWGSGPLPTT GGRTGQACLV PGRFSRPSMR RGLSRTTGGC GDVQPRQD