Gene Franean1_3085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3085 
Symbol 
ID5671464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3638582 
End bp3640099 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content74% 
IMG OID641241983 
Productpropionyl-CoA carboxylase 
Protein accessionYP_001507403 
Protein GI158314895 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGT TGACCACCCG CACCCGCATC ACCGTGGCCG AACAGCCCAG GCCACCGCGC 
GACCCACGGG AACGGCTGGC CCGCCTACTC GACCCGGGAA CGCTCACCGT CATCCCGCAC
TCGCCGCCCT GCCGGGTCAC GGTCTCCCAC GGCCGGGTCG ACGGCACCGA CGTCATCGCC
TACTGCACCG ACGCCACCTC GATGGGCGGC GCGATCGGCG CCGCGGGCGC GCGGCGGATC
GCCGACGCCA TCGACCGGGC GGTCGCCGAA CGCATCCCGG TGATCGGGCT GTGGCACTCC
GGCGGGGCGA GCCTGGGCGA CGGTGTGGAA GCCCTAGACG GCATCGGCCA GATGTTCGCC
GCCATGATCG CCGCATCCGG ACGGGTGCCC CAGGTGTCGG TCGTACTCGG CCCGGCGGCC
GGGGGCGCGG CGTACGGACC GGCCCTCACC GACGTCATCG TCATGGCGCC CGAGGGCAAG
GTGTTCGTCA CCGGGCCCGA CGTCGTCCGC CAGGTCACCG GCGAGCAGAT CGACATGGAC
GGCCTCGGCG GAGCCGACGC ACATGGCCGG CGCTCCGGCG TCGTGCACGT CGCCGCCCGG
TCGGAAGCCG ACGCATACCT GCGGGCGCGG CGGGTGACCA CGCTGCTGGC GGCACCGGGG
GCCTTCGACC TCGCCGCCAC CCGCGACGGA CGCGATCCCG GCTCCCTGCT GCCGGACAAC
CCGCGGCGCG CCTACGACAT CCGCCCGGTA GTACGCGCCG TCCTCGACGG CGCGGTCGCT
CCGGGCGGCC CGGCTGGTTC GGGCACCGGG ACGAACCCGG ACGGCGGGAG CGGCGCGGCG
CACCAGACCG GCCTCGCCGA CGACGACTAC GTGGAACTCC AGCCGCGCTG GGCACCAAAC
GTCGTCGTCG CGCTCGGCCG GCTCTCCGGG CATTCGGTCG GCGTCATCGC CAACAACCCG
CTGCGCAAGG GCGGCTGCCT GGACTCGCTC GCCGCGGAGA AGGCCGCGCG GTTCGTCCGG
ATGTGCGACT CCTTCGGGCT TCCCCTGGTG GTCCTCGTCG ACGTCCCCGG TTACCTCCCG
GGCGTCGGTC AGGAGTGGGA GGGCGTCGTG CGGCGCGGCG CGAAGCTCCT CTACGCGTTC
GCCGAGGCCG TGGTGCCACG GGTGAGCGTC GTCCTGCGCA AGTCCTACGG CGGCGCCTAC
ATCGCGATGA ACTCCCGTTC GCTGGGCGCC ACGACCGTCC TCGCCTGGCC CCAGGCGGAG
GTCGCCGTCA TGGGTGCCGA GGCCGCCGTG GGCATCCTGC ACCGGCGCGC CCTGGCCGCG
GCCGCCCCCG ACGAGCTCGC CGCGCTACGG ACCACGCTCG CCAACGAGCA CACCCGTACC
ACCGGCGGCC TGTCACGAGC GATCTCCCTC GGAGTGATCG ACCGGGTGAT CGAACCGGCG
AACACCCGCA GGGAGCTGAC GCTCGCGCTG GCCACAGCGC CCGGCGACCG CGGCACTCAC
GGCAACATCC CACTGTGA
 
Protein sequence
MTELTTRTRI TVAEQPRPPR DPRERLARLL DPGTLTVIPH SPPCRVTVSH GRVDGTDVIA 
YCTDATSMGG AIGAAGARRI ADAIDRAVAE RIPVIGLWHS GGASLGDGVE ALDGIGQMFA
AMIAASGRVP QVSVVLGPAA GGAAYGPALT DVIVMAPEGK VFVTGPDVVR QVTGEQIDMD
GLGGADAHGR RSGVVHVAAR SEADAYLRAR RVTTLLAAPG AFDLAATRDG RDPGSLLPDN
PRRAYDIRPV VRAVLDGAVA PGGPAGSGTG TNPDGGSGAA HQTGLADDDY VELQPRWAPN
VVVALGRLSG HSVGVIANNP LRKGGCLDSL AAEKAARFVR MCDSFGLPLV VLVDVPGYLP
GVGQEWEGVV RRGAKLLYAF AEAVVPRVSV VLRKSYGGAY IAMNSRSLGA TTVLAWPQAE
VAVMGAEAAV GILHRRALAA AAPDELAALR TTLANEHTRT TGGLSRAISL GVIDRVIEPA
NTRRELTLAL ATAPGDRGTH GNIPL