Gene Franean1_3064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3064 
Symbol 
ID5671443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3618929 
End bp3619792 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content67% 
IMG OID641241962 
Producthypothetical protein 
Protein accessionYP_001507382 
Protein GI158314874 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.379403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCGA CATCTCTGCC ACGACGCACC GGGCAGGGTC GACCCGATCG CGTTGACCAG 
TCCCCGGTGG GCATCGGAGG TCACCAGCCG CACCCCGGAC AGGCCACGGG CGACCAGGCC
CCGGAAGAAC GCCAGCCAGC CGGCACCGTC CTCGCTGGAC ACGACGTCGA GGCCGAGGAT
CTCCCGGTGC CCGTCACCGT TGACCCCGAC CGCGAGCAGG CAGTGCACGT TGATCACACG
GCCGTCCTCA CGGACCTTCA TCGTCAACGC GTCCGCCTGG ACGAACCGGT ACGGACCGGC
GTCCAACGGC CGGGACCGGA ACGCCTCGAC CTGGGTGTCG AGGTGCTTCG CCAGCTCGGA
CACCTGCGAT TTCGAGATGT GCGCGACCCC GAGCTGCTCG ACGAGCTTGT CGACCCGCCG
GGTCGATACC CCGAGCAGAT AGGACGTCGC CACGACCGAG ATCAGCGCCT GCTCGGCGCG
ACGACGCCGA GTCAGCAACC ATTCCGGGAA GTACGAGCCC TGACGCAGCT TCGGCACCGC
CAGCTCGATC GTCCCAGCCC GGGTGTCCCA TTCCCGCATC CGGTAGCCAT TCCGACGGTT
AACCCGATCC GGGGATATCT CCCCATACTC GGCGCCGCAG ACCCCGTCCG CCTCGGCGCC
CATCAACGCC TCCGCGAACG CCTTCACCAT CGATCCCAGC AGGTCAGGAC TCGCTGCCAT
CAGTTCCTTG CCGAACGAGT CAGCATCGGT CACAGTCGGG CGCACGGCCA TCGCGTATCT
CCTTGTCGAG TTCTTCGCTG TTCTCGAAAA GGATCACGCG GTGGTCGCTC TACGTCACGG
ACCGCCACTC CGGCGAGTCG CTAG
 
Protein sequence
MSPTSLPRRT GQGRPDRVDQ SPVGIGGHQP HPGQATGDQA PEERQPAGTV LAGHDVEAED 
LPVPVTVDPD REQAVHVDHT AVLTDLHRQR VRLDEPVRTG VQRPGPERLD LGVEVLRQLG
HLRFRDVRDP ELLDELVDPP GRYPEQIGRR HDRDQRLLGA TTPSQQPFRE VRALTQLRHR
QLDRPSPGVP FPHPVAIPTV NPIRGYLPIL GAADPVRLGA HQRLRERLHH RSQQVRTRCH
QFLAERVSIG HSRAHGHRVS PCRVLRCSRK GSRGGRSTSR TATPASR