Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3064 |
Symbol | |
ID | 5671443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3618929 |
End bp | 3619792 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641241962 |
Product | hypothetical protein |
Protein accession | YP_001507382 |
Protein GI | 158314874 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.379403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCGA CATCTCTGCC ACGACGCACC GGGCAGGGTC GACCCGATCG CGTTGACCAG TCCCCGGTGG GCATCGGAGG TCACCAGCCG CACCCCGGAC AGGCCACGGG CGACCAGGCC CCGGAAGAAC GCCAGCCAGC CGGCACCGTC CTCGCTGGAC ACGACGTCGA GGCCGAGGAT CTCCCGGTGC CCGTCACCGT TGACCCCGAC CGCGAGCAGG CAGTGCACGT TGATCACACG GCCGTCCTCA CGGACCTTCA TCGTCAACGC GTCCGCCTGG ACGAACCGGT ACGGACCGGC GTCCAACGGC CGGGACCGGA ACGCCTCGAC CTGGGTGTCG AGGTGCTTCG CCAGCTCGGA CACCTGCGAT TTCGAGATGT GCGCGACCCC GAGCTGCTCG ACGAGCTTGT CGACCCGCCG GGTCGATACC CCGAGCAGAT AGGACGTCGC CACGACCGAG ATCAGCGCCT GCTCGGCGCG ACGACGCCGA GTCAGCAACC ATTCCGGGAA GTACGAGCCC TGACGCAGCT TCGGCACCGC CAGCTCGATC GTCCCAGCCC GGGTGTCCCA TTCCCGCATC CGGTAGCCAT TCCGACGGTT AACCCGATCC GGGGATATCT CCCCATACTC GGCGCCGCAG ACCCCGTCCG CCTCGGCGCC CATCAACGCC TCCGCGAACG CCTTCACCAT CGATCCCAGC AGGTCAGGAC TCGCTGCCAT CAGTTCCTTG CCGAACGAGT CAGCATCGGT CACAGTCGGG CGCACGGCCA TCGCGTATCT CCTTGTCGAG TTCTTCGCTG TTCTCGAAAA GGATCACGCG GTGGTCGCTC TACGTCACGG ACCGCCACTC CGGCGAGTCG CTAG
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Protein sequence | MSPTSLPRRT GQGRPDRVDQ SPVGIGGHQP HPGQATGDQA PEERQPAGTV LAGHDVEAED LPVPVTVDPD REQAVHVDHT AVLTDLHRQR VRLDEPVRTG VQRPGPERLD LGVEVLRQLG HLRFRDVRDP ELLDELVDPP GRYPEQIGRR HDRDQRLLGA TTPSQQPFRE VRALTQLRHR QLDRPSPGVP FPHPVAIPTV NPIRGYLPIL GAADPVRLGA HQRLRERLHH RSQQVRTRCH QFLAERVSIG HSRAHGHRVS PCRVLRCSRK GSRGGRSTSR TATPASR
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