| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2981 |
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| Symbol | |
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| ID | 5671365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3506257 |
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| End bp | 3507840 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641241885 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001507305 |
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| Protein GI | 158314797 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGTG GAGCACGATT AGGCGCCGTG GCGGTCACCT GCTGCGCCGC GCTTGTCCTC
GCCGCCTGTG GAGGCGGCGA GTCAGACGGT TCCTCAAGGA CCTCCGAGAA CGGGGCCTCC
GGCGCGACCG GCAACCCGGT GCCCGGCGGC GAAGGGCGGA TCCTCCTGCT GAGCGAGCCG
CGCAGCCTCG ACCCGGCGGC GCTCAACAAC GTGTACGCGG CCGGCGCTGC CGTCGGCAAC
GCCCTGTACG GCACGCTGAT GACCAACAAC GAGGCCGGCG AGATCCAATA CTCGATGGCC
GAGTCCTTCA CCACGCCGGA CAACGGCGCC ACCTTCGAGC TGAAGCTCCG GCCGGGGCTG
GCCTTCTCGG ACGGCACCGC GCTGACCGCC GAGGCCGTCA AATACAACTG GGACCGGATC
AAGGACCCCA AGCTGGGCGC TTTCAGCCGG GCCGAGGCAG CGATGATCGC CTCGTCTGAG
GTGGAGGACG AGACCACTCT CAAGGTCACC ATGGTCGCGC CGGTACCGAA GTACGCCCAG
GCCATCGTCA CCTCGACGCT CAACTGGATC GCGGAGCCCG CCGCTCTGGA GAAAGGGCAG
CAGAAATTTG ACACCCAGCC GATCGGCGCC GGCCCCTTCA CGCTGAGTAA ATGGACACGC
CAGGCCGAGA TGGAGCTCGT CAGGAACACC CGCTACTGGG ATGCTCCCAA GCCCTACCTC
GACCGTCTTT CTTTGCGGCC GGCGACCGAC AGTAGTCAGC GCTACAACAC CGTGCTCACG
GGAGGTGCGG ACCTCGCCGT AGAATCCAGC TGGGTCAACC TGGACAAAGC GAAGCAGGCC
CGACTCTCGA CGAACGTGAT GCAGCTCAGT GGCGGGATAT TCATCGCCCT GAACCTGCGC
AGCGAACCAT TCTCCGATAT TCGCGCCCGG CAGGCCCTCG CAGCCGCGAT CGACATCGAG
ACACTGAACC TCGCCGCTTA CAGCGGCACC GCCGAGGCGG CCGATACCCT TTTCAGTAAA
ATTTCTCCGT ATCATTCTGA TGTCCCGCTG CACACCACCG ACCACGACAA GGCCCAGCGC
CTGTTCGACG AACTGGCCGG TGAGGGAAAG CCGGTCACCT TCACCTTCAA AACACCTCCG
ACGACCGAGA ACAGGGCGGT CGCGGAAAAC ATCCAAACCC AGCTCAGCAC CTTCAGGAAC
GTGAAAGCCG AAGTCAAGGT CATCGAGGTC GCGGAGTTCT CTCAGCTGCG CACAACTCAT
GACTTCGACG CGGCGGCCTC CTCGGCGCTG TTCCAGGACC CTGACCCGCG GCTGACCACC
ACGTTCGCCG GCGACTCGCC GGCCAACCTG ACCGGCATCG ACGACGCGGT ACTGAACGAG
AGCCTGCAGG CCGGCCGGGT CGCGCGGACC GAGGCGGAAG CCAAGGACGC CTATGTGACC
GTGCAGGAAC GCCTGGCGGT GGTCACTCCA GTGATCTTCA CCGTGCGGGC GGCACCCAGC
ACCATCTCGA GCCCCAACGT GGGCGGCATC GTCCAGTACG GCATCGGCTC GCTGCTCCCC
AGCGAGCTGT GGATCAAGCC CTAG
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| Protein sequence | MIRGARLGAV AVTCCAALVL AACGGGESDG SSRTSENGAS GATGNPVPGG EGRILLLSEP
RSLDPAALNN VYAAGAAVGN ALYGTLMTNN EAGEIQYSMA ESFTTPDNGA TFELKLRPGL
AFSDGTALTA EAVKYNWDRI KDPKLGAFSR AEAAMIASSE VEDETTLKVT MVAPVPKYAQ
AIVTSTLNWI AEPAALEKGQ QKFDTQPIGA GPFTLSKWTR QAEMELVRNT RYWDAPKPYL
DRLSLRPATD SSQRYNTVLT GGADLAVESS WVNLDKAKQA RLSTNVMQLS GGIFIALNLR
SEPFSDIRAR QALAAAIDIE TLNLAAYSGT AEAADTLFSK ISPYHSDVPL HTTDHDKAQR
LFDELAGEGK PVTFTFKTPP TTENRAVAEN IQTQLSTFRN VKAEVKVIEV AEFSQLRTTH
DFDAAASSAL FQDPDPRLTT TFAGDSPANL TGIDDAVLNE SLQAGRVART EAEAKDAYVT
VQERLAVVTP VIFTVRAAPS TISSPNVGGI VQYGIGSLLP SELWIKP
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