Gene Franean1_2963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2963 
Symbol 
ID5675704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3489518 
End bp3490351 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content68% 
IMG OID641241868 
Producttransposase IS4 family protein 
Protein accessionYP_001507288 
Protein GI158314780 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCA CATACACCGC CGAGTTGCCC ATCAGCGATC ACACCGTCTT CCGCCTGGCG 
GGTCTTCTCG TCGCGGAGCG TCAGCGTCGC GGCACCCGCA ACGGCACCCG CACGCTGTCC
ACGTTGGAAC AGGCGGTCAT GGTCCTGCGC TGGTTCTGTG ACGGCACCAG GACCAGCCGG
CTCTTCAAGG ATCACGGGGT GTCCCGGTCG GTGGGCTACC GCTACCTACA CGAGGGCACT
GCCGTGCTTG CCTGGCAAGC CCCTGACCTG CGCGAAGCGC TGATGCGCGC CAGGATCGCC
GGCTACGGCC ACCTCATCAT CGACGATACG ATCATCGAGA CCGACCGGCT GCGCATACCG
GGCCCGACCG AGGGCGTGGA CCTGTGGTGG TCCGGCAAGA TCTCCAACCA CGGCGGCAAC
ATCCAGATCC TCTCGGCCCC CGACGACGGC TGGCCGCTGT GGGTCTCGGA CGTCAGGCCC
GGCCGCGAGC ACGACTCGAC CGCGCTGTGC GCCGGAGGCG CGCAGCCGAT CCTTGAGGAA
TGGGCCGCCG ACCCGCACGA GGTCCTGTTC GACCTCGGTT ACGAAGGGTT GGGTAGCCCG
GCCGGACCGC TCGCGACCGC CTACAAGAAG CCCAAGGGCG GCGCACTCAC CGACGAACAG
AAGGCGCACA ACCGGGTCCA CAACGCGCTG CGCGCCGTCG GCGAACGCGC GAACGCGCTG
CTCAAGGTCA CCTTTCGGCT GCTCCGCAAC ATCACGATCG ACCCCTGGAA GATCGGACTC
GTCGCGAAAG CCGCCCTCGT CATCCTCCAC ACCGAGCACC GCAGGACCGC CTGA
 
Protein sequence
MSFTYTAELP ISDHTVFRLA GLLVAERQRR GTRNGTRTLS TLEQAVMVLR WFCDGTRTSR 
LFKDHGVSRS VGYRYLHEGT AVLAWQAPDL REALMRARIA GYGHLIIDDT IIETDRLRIP
GPTEGVDLWW SGKISNHGGN IQILSAPDDG WPLWVSDVRP GREHDSTALC AGGAQPILEE
WAADPHEVLF DLGYEGLGSP AGPLATAYKK PKGGALTDEQ KAHNRVHNAL RAVGERANAL
LKVTFRLLRN ITIDPWKIGL VAKAALVILH TEHRRTA