Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2938 |
Symbol | |
ID | 5671324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3454641 |
End bp | 3455426 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641241844 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001507264 |
Protein GI | 158314756 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGG CGGTGGGCCC GTTGGCTGGG CGGACGGCGG TGGTGACGGG CGGCTCGCGA GGGGTCGGTG CCGCGATCGG CGCGCACCTG GCGGGGCTCG GGGCCGCCGT GGGGCTGACA TACCACCGCG CTGCCACCGC CGCGGACGAG GCGGTCACGG CGATCCGCGC GGGCGGTGGA CGCGCCGTGG CGTTTGCCGC CGACATTGCC GACAACCGGG CCGGCGCCAC CCTCGTCGAG GACATCCATG ACTCTCTCGG CCCGGTCGAC ATCGTCGTCA GCAACGCCGG GGTCGCCAGC CGGGGGCTGA CGGTGGCCGA CACGTCGGCG CAGGAGTTCC AGCACCTGAT GCAGGTCCAC GCCTTCGGGC CGCTCGCGCT GATCCGGCTC CTCCTGCCCG ACCTGCGGAC AGCCGGCCGC GGCGACGTCG TCGTGGTCTC GAGTACGACC GCCGCGTCGG CGCCCGCTCG GTGCGCGCCC TACACGATGG CCAAAGCCGC GATGGAGGTC GCCGCGCGCA CCCTCGCCCG GGAGGAGCGC CGACACGGGA TCCGGGTCAA CATCGTCGCC CCTGGGCTCG TCGCGACCGA CATGGGCTCG CGGCTGGTCC GCGCGACGAG CGGGAAACAC GTCCATGACC TCGACGGCGA CGCGCCGTTC GGCCGGGTGT GCACCCCCGA CGACGTGGCC GCGGTCGTCG CGTTCCTGCT CGGGCCGGGC GCCGGGTACG TCACCGGCCA GCGGATCGTC GTCGACGGAG GCGGGCCGGA TCCGCAGGTC TACTGA
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Protein sequence | MTAAVGPLAG RTAVVTGGSR GVGAAIGAHL AGLGAAVGLT YHRAATAADE AVTAIRAGGG RAVAFAADIA DNRAGATLVE DIHDSLGPVD IVVSNAGVAS RGLTVADTSA QEFQHLMQVH AFGPLALIRL LLPDLRTAGR GDVVVVSSTT AASAPARCAP YTMAKAAMEV AARTLAREER RHGIRVNIVA PGLVATDMGS RLVRATSGKH VHDLDGDAPF GRVCTPDDVA AVVAFLLGPG AGYVTGQRIV VDGGGPDPQV Y
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