| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2918 |
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| Symbol | |
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| ID | 5671305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3434912 |
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| End bp | 3435760 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641241825 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507245 |
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| Protein GI | 158314737 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTGC TGGACACGTT CAGCTACCGA GGTAAGCGGG CGGTCGTGGT GGGCGGCGCC
AGCGGCATGG GTGCCGCCGC GGCTCTGCTC GTACAGCAGG CCTGTGGCGC CACGGTGGTG
ATGGACTACG CCGACGTCAC GCTCGCGGAC GCGACGGCGA TGCACGTCGA TCTGGCCGAC
CGGACGTCGA TCGACGCAGC TGTCGATCAG TGCGGCGGAC CGGTGGACGC GCTCTTCATG
TGCGCGGGCG CTGCCGAGGG CACTCCGGGA ATCGAACGGA TCAACTTCGT CGGCCACCGG
CACCTGATCG AGCGCATGCT CGCGAAAGAC CTGCTGCCAC GCGGAAGTGC GATCTGCTTC
ATCTCGTCCG CGGCCGGGCT CGGCTGGGAG AAGAACTTCA CCAAGATCTC CGAACTTCTC
GACATCGTCG ATTTCGACGA GGCCGCGCGG TTGATGCGAG ACACCGGGAC GGCCACCTAT
CTCGGGACCA AGCAAGCCGT GTGCGCGTAC GTCGCGCGGG AGGCGCTGCG CTTCCTCCAG
CACGGAATCC GAATCAACGC GATCTGCCCG GGACCTACCG ACACCCCGCT GGCACAGGCG
AATAGGGACA CATGGCTCGA AGGTGGCTCG GACTACCGAG CCAAGGCCGG GATCCGTCCG
TCGACGCCGG CGGAGCAGGC ATACCCCATG CTGTTTCTCT GTAGCGACGC CGCGGTCTCG
ATCACCGGAA TCACTCTTCT GTCCGACGCC GGATGGCTGA CCGCGGGGAT CACCGGTTCT
TTCCCCGGGG CGACGGCGAT CACCAGCATC CTTCTCAACC GTTCACCCGT CTATCAGCAA
GGAGATTAA
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| Protein sequence | MTLLDTFSYR GKRAVVVGGA SGMGAAAALL VQQACGATVV MDYADVTLAD ATAMHVDLAD
RTSIDAAVDQ CGGPVDALFM CAGAAEGTPG IERINFVGHR HLIERMLAKD LLPRGSAICF
ISSAAGLGWE KNFTKISELL DIVDFDEAAR LMRDTGTATY LGTKQAVCAY VAREALRFLQ
HGIRINAICP GPTDTPLAQA NRDTWLEGGS DYRAKAGIRP STPAEQAYPM LFLCSDAAVS
ITGITLLSDA GWLTAGITGS FPGATAITSI LLNRSPVYQQ GD
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