| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2829 |
|---|
| Symbol | |
|---|
| ID | 5671218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 3346583 |
|---|
| End bp | 3347554 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641241738 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001507158 |
|---|
| Protein GI | 158314650 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACCAG CGACCCCGCC CATCCCCGCA CGTCCACCGG AAATGCCACA GGTGGAACAC
CTCGTCCTGG AGGCGGCCTG CCTGCCCGCA CCCGTCGAGC AGCAGCACGC CACGATCCGA
CCGCTGCTCA CCGAGCCGAC ACTGCACTGG GGCACGCTGC TCGCCACCGC CATCGAGCAC
AAGGTGCTGT GCCTGCTCGC CGACACCCTC ACCACCACCG GCCTGGCAGA CGAGGTCCCG
TCGGCGTTCC GCCGCTTCCT GGCCTCCGTC CTACGCACCA GCCGACACAA GACCGCCGTC
CACCGCGCGC AGGCCGCCGC TCTCACCGAC GCGGCGGCCC GCCAGCAGCT CGCCTTCGCG
GCCGTCAAAG GCATCGCCCT GGAGTCCCAG CTGTACGGAG GACGCGGCGC CCGCGAGTTC
AGCGACCTCG ACGTCCTCGT CGCCCCGGAC CACGCCGACG CCTTCCGTCG CGCCCTACGC
CTGCTCGGCT ACCAGCCCGG ACACTACGAC TCGACCACCC ACCGCGTCGC CCTTGACGAC
CCGACGTCAG CGACCTACAC CCGCCTGCAC GACGACCTTG TCACACCCTG CACGGCCGTC
GACATCATCA CCGACCTGCC CCAGCCCGCG GGCGTTCCCC CTGACCTGGT GCCGAGCATG
CTCGATCGCC GCCGATCCCA GCCTCTTCCT GGCCACCCGC AGGTCGACCT GCCCATCCTC
GACCCCCTCG ATCACCTCGC CGTCGTCCTC CTCACGGCGC GACGCAAGAC CCGCGCGGGC
AGACCAGTCT TCCTGCGCAC ACGCGCCGAC GCGCTGCGCC TCATCCCAGC GAACACGCAG
ATCAGGCACG CCCGGCTATC GGCGGCTGGG GATGTCCGCG TCCTCGACGA CTTGTGGGAC
CCCTGCCGCG CCGACGGGCG GTGGGCACCC ACGGCAGGCA GCTGGAGTCG CACCAACAGG
GAAGGATCTT GA
|
|---|
| Protein sequence | MRPATPPIPA RPPEMPQVEH LVLEAACLPA PVEQQHATIR PLLTEPTLHW GTLLATAIEH
KVLCLLADTL TTTGLADEVP SAFRRFLASV LRTSRHKTAV HRAQAAALTD AAARQQLAFA
AVKGIALESQ LYGGRGAREF SDLDVLVAPD HADAFRRALR LLGYQPGHYD STTHRVALDD
PTSATYTRLH DDLVTPCTAV DIITDLPQPA GVPPDLVPSM LDRRRSQPLP GHPQVDLPIL
DPLDHLAVVL LTARRKTRAG RPVFLRTRAD ALRLIPANTQ IRHARLSAAG DVRVLDDLWD
PCRADGRWAP TAGSWSRTNR EGS
|
|---|
| |