Gene Franean1_2817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2817 
Symbol 
ID5671206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3333846 
End bp3334289 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content61% 
IMG OID641241726 
ProductNUDIX hydrolase 
Protein accessionYP_001507146 
Protein GI158314638 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.30538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGAAC GTTACCGCAG CATCGTTGAC GTCTATGTCC TGCTCATACG AGACGACAAG 
ATCCTCCTCA TGGAGCGCGC CAACACCGGA TACGCCGACG GCCAGCTCTG CCCGCCCAGC
GGCCATCTCG AAGAGGGTGA GTCTGTTGTT GATGGTGCGG TGCGCGAGGC CGCGGAGGAG
GTCGGCATTA CACTCGACCC GGACGACCTT CAGTGTGTGC ACGTTGTACA TCACCGCAAC
CCGCAGGGCC AAGGGCGCAT CGGGTTCTTC TTCTGCACCG ACAGATGGGA GGGAGAACCA
GAAAATCAGG AACCCCGCAA ATGCGCTCGC CTACTCTGGA TTGACCCTGA TCGCCTACCG
CCAAATACGG TTGGGTACAC AGCCGCAGCC GTCGCCAAAA TCCGAAGCGG CCGCACATTC
TCGATTCACG GCTGGGAGAC ATGA
 
Protein sequence
MPERYRSIVD VYVLLIRDDK ILLMERANTG YADGQLCPPS GHLEEGESVV DGAVREAAEE 
VGITLDPDDL QCVHVVHHRN PQGQGRIGFF FCTDRWEGEP ENQEPRKCAR LLWIDPDRLP
PNTVGYTAAA VAKIRSGRTF SIHGWET