| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2716 |
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| Symbol | |
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| ID | 5671107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3214588 |
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| End bp | 3215385 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641241628 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507048 |
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| Protein GI | 158314540 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.839992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGAAATC CGTTCAGCTA CCAGGACAAG CGGGTCGTCG TCACTGGCGG TGCCTCCGGC
ATCGGCGCCG CTCTGCTCGA CCTTCTCGGC GAGCTCGGCA CGCCGCACCT CACAGTGATC
GACCGGCAGC CGCCCACCGC TCGGGTGGAC CACTTCGTGG AGGCCGACCT GTCCTCCCGG
GCAGGCGTCG ACGCCGCCGC GGCGGCGGTC AGAGGTCCGG TGGACGTCCT GTTCAACAAC
GCCGGCGTCG CCGGCACGCA GCCCGCACGG GTGGTTTTCA GCGTCAACTA TTTGGCGGTC
CGGCGGCTGT CAGAGCAGCT CGCGGGACGG ATGCCGGCCG GTGGGGCCGT CGTCATCACC
TCGTCGATGG CGGGGATCGG CTGGCAGGCG CACCAGGACG AGCTGGGCAA GCTGATGACG
ATCGACGACT GGGACGAAGC GCTCACCTGG CTGGACGCAC ACCCCGAGCG CGCCAGCGAC
CCGTACGCAT TGTCCAAGGA ATGCACCCAG CTCTACACGC TCCATGCTGC CCGCGTGGCC
AGCCGGGCGG GGACCAGGAT CAACAGTGCC TGTCCTGGTG CCACGAGCAC GCCGCTGCTG
GGGGACTTCC GGTTGACGAT GACCGACGAG ATCATCGACT GGTCGGTCCG CCAGGGCATC
GGACGGCCGG CCACGCCTCG CGAGGTCGCG CAGATCCTCG CGTTTCTCGG CTCGGACGCC
GCCGGCTACC TCAACGGAGT GAACCTCCCG GTGGATGCGG GCCTGCAGGC GGCTCTCGCG
ACAGGCCAGA CCGACTAG
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| Protein sequence | MGNPFSYQDK RVVVTGGASG IGAALLDLLG ELGTPHLTVI DRQPPTARVD HFVEADLSSR
AGVDAAAAAV RGPVDVLFNN AGVAGTQPAR VVFSVNYLAV RRLSEQLAGR MPAGGAVVIT
SSMAGIGWQA HQDELGKLMT IDDWDEALTW LDAHPERASD PYALSKECTQ LYTLHAARVA
SRAGTRINSA CPGATSTPLL GDFRLTMTDE IIDWSVRQGI GRPATPREVA QILAFLGSDA
AGYLNGVNLP VDAGLQAALA TGQTD
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