Gene Franean1_2652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2652 
Symbol 
ID5671045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3137656 
End bp3138162 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content70% 
IMG OID641241567 
Producttransmembrane efflux protein 
Protein accessionYP_001506987 
Protein GI158314479 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGGACC GAGATCGCCG CAACCCGCTC CTCGCGTACG CCGTGAGTGC GGCGGGCAGC 
GGCGTCGGGT CCGGGGCACT GCCGATCGTC GCCGTTCTCG TCCTGCACGC CTCTGCGTTC
GAGGTGTCGA TGCTCTCCGG CCTGGCCGGA CTCACCGCGG CGGCGGTTCT GCTGCCGCTG
GGCGCCGGTA TCGAACATCG ACGCAAACGA CCCGTGATGA TCGCGGCGGA TCTGGTGCGA
TGCGCCGCGC TCGCCAGCGT GCCCGCTGCT GCCGCGCTGC ATCTCCTTAC CTATCCGCAG
CTGGTCGCGG TTGGGGCGAT CTCCACGATC GCGTCGATCG CGTTTGCCGC CGCCAGCGGG
GCGCATCTGA AAGCGATGAC GGACCCGGCG GGACGTCTGG CGGCGAACAG CTGGTTCGAG
ACCGCCGACT GGACGGCGAG TACGGCGGGT CAGTCCTCGG CGAGCTCCCG CGACGAGGGC
CGTGGCACCG TCGGTCGAAC GCTATAA
 
Protein sequence
MRDRDRRNPL LAYAVSAAGS GVGSGALPIV AVLVLHASAF EVSMLSGLAG LTAAAVLLPL 
GAGIEHRRKR PVMIAADLVR CAALASVPAA AALHLLTYPQ LVAVGAISTI ASIAFAAASG
AHLKAMTDPA GRLAANSWFE TADWTASTAG QSSASSRDEG RGTVGRTL