Gene Franean1_2530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2530 
Symbol 
ID5670924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3009439 
End bp3009951 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content67% 
IMG OID641241445 
Producthypothetical protein 
Protein accessionYP_001506866 
Protein GI158314358 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCGA CGATGGACGC GCCATGGGCG TCGGCGTACC TGCCGGCCGA TCTCCACGGC 
GGTGCAGTGC CGCAGCACGC CCTCGAATAT CGAGGAGACC TCGGAGCGCA GCGTCCGTGG
CAGTTGGCCA GGTCGGGGAA CAACAACCCG AAGGGCCCGG GCTCGGGTCC GTGTCACCAG
GCGCCAACGG GCGTGTTGCC GCAGCTCAGG ACCAATGTTG ACGAGGGAGA AGCATCCACC
GAAAGACGAT GGGTTCCCGC GGCGGCACTG GCACACGGCC GCCGGCCGGT GGAGGTCAAC
ACGGACAAGG CCTCTGCCTA CCCACGGATC CTCTACGAGC CGCTACCCGA GACCTGCCAC
GTCGACGCGC GGAGGGAGAA CAACCGGATC GGGTCCGACC ACAGCCGACT CAAAGGCCGA
CTCCGGCCGA TGCGCGGACC GAAACGGCTG CGTTCCACCC AGACGATCAG TGCCGGGCAC
CTTGGTTCAG AACATCCACC GCGGCCACTA TGA
 
Protein sequence
MHPTMDAPWA SAYLPADLHG GAVPQHALEY RGDLGAQRPW QLARSGNNNP KGPGSGPCHQ 
APTGVLPQLR TNVDEGEAST ERRWVPAAAL AHGRRPVEVN TDKASAYPRI LYEPLPETCH
VDARRENNRI GSDHSRLKGR LRPMRGPKRL RSTQTISAGH LGSEHPPRPL