| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2526 |
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| Symbol | |
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| ID | 5670921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3005403 |
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| End bp | 3006671 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641241442 |
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| Product | diguanylate phosphodiesterase with GAF sensor(s) |
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| Protein accession | YP_001506863 |
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| Protein GI | 158314355 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACGC GGATGGCGTC CAAGGGTTCC TGTCTGGGCC CGCGGATCAA TGTTTCCGAA
CCGGGCTCGA TACTCCCCGA CCTGGTGGCA GTTCTGCGCC GCCGGTTACG GATGGACGTC
GGCTGGCTCG GCCGGTTCGT CGACGATCTT TTGGTTCTTG AGGTGCTGTG CGGGGATGCA
GGGCGGTTCG GGCTCAGCCC GTACTCGACA GTGCGACGCC CGGGGTCACT GTGGGGAGCA
GTCGAGCGGG GCGATCTGCC GTCGCTGGTG CCCGACACCC GCGCGGATCC TCGTGCCGCT
GAGCTGGCGG GGGCGCGGGA GCTGGGTGTG CGTGCCTTCG CCGCGGCGAT GCTCACCGAC
AGCGAGGGCG AGCCGATTGG CATGATCGGC TGTGTGGGGA GCGAGCCGAT CCCGGCGCTG
CCCCAGCACG ATGGCGGCTT CCTGCGCCTG CTCGCGCGGT TCCTCACCGA CTTCGTCATC
GATGTTCGCG ACCTCTGGGA CAGACAGAGC CGAACCTGGC GCGAGATCCG TGCCGCGCTG
GACGGCGCCG CGCTGCGGAC CACCTTCCAG CCGGTGGTCG ACCTGCACGC GGGCCGACGT
GGCCGGGTCG TCGCGGTCGA GGCACTGACC ACGTTCCCCG CCTTGGACAG CTCACCCGAG
GACGTGTTCA AGAAGGCGAC GACGGTCGGC TTGGGCCCCG AACTCGAACT GGCCGCGCTG
GGCCGGGCCG TTCAGTCACT GCCCGACATC CCGCCCGGGA TCACGCTGGC GATCAACCTG
TCGGCCGCGG CGCTGGCCGA CGACGCGGTC AAGCTGATCC TGTCGACCGG TTCACCCGAG
CGCCTAGCAG TCGAGATCAC CGAGCACGAG TACATGGTGG ACAGCGACAA CCTGGCACGG
GCCTTCGACA CGCTGCGCGG CCACGGCACC CACATCGCCG TTGACGATGT CGGCACCGGT
TACGCCGGCC TTGAACAGCT CCTACGACTA CGACCGGACA TCGTCAAGAT CGACCGGTTT
ATTACTCACG GTATCGACCG TGATCCGGCC CGGAGGGCAG TCGCCGCCGG CTTGACGACA
GTGGCGGCCG CGATCGACGC GAAGATCGTC GCCGAAGGCG TCGAATCACA CTCTGAAGTA
GAAGCCCTCC GGGACGCGCA CATCCGATAC GCCCAGGGTT ATCTCCTCGG CCGTCCCACC
CCCAACATCC ACGACGCGTG CTCGAGACCG CCGAGGTGTC GGCAAAGGGA GCGTCCGAGA
AACGGGTAG
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| Protein sequence | MGTRMASKGS CLGPRINVSE PGSILPDLVA VLRRRLRMDV GWLGRFVDDL LVLEVLCGDA
GRFGLSPYST VRRPGSLWGA VERGDLPSLV PDTRADPRAA ELAGARELGV RAFAAAMLTD
SEGEPIGMIG CVGSEPIPAL PQHDGGFLRL LARFLTDFVI DVRDLWDRQS RTWREIRAAL
DGAALRTTFQ PVVDLHAGRR GRVVAVEALT TFPALDSSPE DVFKKATTVG LGPELELAAL
GRAVQSLPDI PPGITLAINL SAAALADDAV KLILSTGSPE RLAVEITEHE YMVDSDNLAR
AFDTLRGHGT HIAVDDVGTG YAGLEQLLRL RPDIVKIDRF ITHGIDRDPA RRAVAAGLTT
VAAAIDAKIV AEGVESHSEV EALRDAHIRY AQGYLLGRPT PNIHDACSRP PRCRQRERPR
NG
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