| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2467 |
|---|
| Symbol | |
|---|
| ID | 5670863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 2937401 |
|---|
| End bp | 2938477 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 641241384 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001506805 |
|---|
| Protein GI | 158314297 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00359465 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACCA GTTCATCGGA GACCGGCACG TCCAGTAACG GCGCCGGCGC CATCAGCGGC
TCGGTCGGTC GCCCGGAGTC GATCCAGGCG GTCACCCCTC CCTTCTCCGC CGTGCCGCCG
GCGAGTGCCA CGGCCTCGGC GGCGACCAGG TCGGGAAGCG CTCCCACCCA GGCCGACGAG
GCGGGTACCG ACCAGCACAC GGCGCCCCGC CCACCCGCCG CGGAGCCGGC CTCCACCAGC
TCGCCCGCCG CGCCCGCGCC CGCCGGCGGC TCGCCTGCCC CGTCTTCTCC CACCGCGACG
AGCTCGCCCG TTGCCGCGAG TTCGACTGCC GAGGCCTCGA CAGCGGGCCC GGCGTCCGGC
CGGTCCACCT CCGCCCGAGG CTCGCGGGCG GGCGCGTCCC GCGGCACGAC GGCCCGCGCC
GCGGCGACCG GCACCAGGGC CACGGGCACG CCGTCCCGCG GGACGGCGGC TCGGGGCGGC
ACGGCCCGCA CGGGCACGGC GCGGAGCACT ACGGCGCGGA CGACCAGCGC GCGGAGCACA
ACGGCGCGTG GGAGCACGAC CCGTCCGACG GGGAGCGGTC CCAAGCCGGA ACGCGCCGCC
GCGACCCGGG GGCGGTCGAC GCGCACGGCG GCGCCGCAGC CCGCGCAGCC GGCGGTGGCT
CGGGCGGCGG CGGCTCGGCC GGCAGGGGCC CGGCCGACGA CGTCCCGGTC GGTCGTGTCC
CGGGCGGCTG GCACGGTTCC CGGAGCGGCC GCGTCGGCGG TCACCGCCGT CCAGAAGCTG
TTTCGTGGGC GCCGGGAGCG GGCGGGGCGG GTCGTTGTCG TGCGCCTGCC CTATGTCACC
GCGCGGCTGG AGGTGGCGCC GCCACCGCGG ACCGACGGCG TCCGGATCGG GCCGCTCGCC
CTCCCGTCGG CGAAGCAGAC CGCCTACTAC GCGGGCCTCG GCGCGCTGGC CGCCGTCGAG
ATCATCGAGT GGCCGATCGC GGCCGCGATC GCCGCGGGTA CCTATGTCTC CCAGCACAGC
CGGCCCGTGA GCGCGGGCCG CGACGGCGGC ACCGGCCACC GTTCGCCGAG CGCCTGA
|
|---|
| Protein sequence | MATSSSETGT SSNGAGAISG SVGRPESIQA VTPPFSAVPP ASATASAATR SGSAPTQADE
AGTDQHTAPR PPAAEPASTS SPAAPAPAGG SPAPSSPTAT SSPVAASSTA EASTAGPASG
RSTSARGSRA GASRGTTARA AATGTRATGT PSRGTAARGG TARTGTARST TARTTSARST
TARGSTTRPT GSGPKPERAA ATRGRSTRTA APQPAQPAVA RAAAARPAGA RPTTSRSVVS
RAAGTVPGAA ASAVTAVQKL FRGRRERAGR VVVVRLPYVT ARLEVAPPPR TDGVRIGPLA
LPSAKQTAYY AGLGALAAVE IIEWPIAAAI AAGTYVSQHS RPVSAGRDGG TGHRSPSA
|
|---|
| |