Gene Franean1_2438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2438 
Symbol 
ID5670834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2900347 
End bp2900940 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content76% 
IMG OID641241355 
Productputative non-heme haloperoxidase 
Protein accessionYP_001506776 
Protein GI158314268 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.34557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.921062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCT CGACAACGAT CAGCCCCCCG CTCGCGGACT ACGACGCCGT CCCGGGTGAC 
GACCTCCTCG CCGAGCCGGT CCGGGTGGCC GTCGCGATAC TCATGGGGCG GGGCGAGAGC
CGCGAGCCCT ACGAGTGGCT CGCCCGGCGG CTGGCGCTCG ACGGTTACGC CGCCGCGGTC
GTTCCCGCCG GCGGGAACGT GGCGCACGCC GTCGGCGAGG TGCGCCGCCC CGGACTCCCC
TTCGTCCTCC TCGGCTCGGA CTCGGGCGCG CTGGCCGCGC TGGCGATGGC CGGCTCACCC
GCCGTGCGCC CCGACGGGCT TGTCCTGCTC GGGCTGCCGC TGCTGCACGT GCCGGTCGCC
GGCATACCTG TCGGCGACCC GCCGCCGCGG GTGCTGCCCG ATCTCCCCAT CCTGCTCATC
CACGGCCGGG ACGACCCGAT CAGCCCGTTG CAGCTGGTGC GGATGACCAC CCGGACGGCC
GCCCGGACCG AGCTGACCGT GGTCCCCGGT GGGCACGCCG TGCTGGCGGG GCCGGGCCGG
CGCAGTGTCC CGGCCCGGGT GCTGCTCTTC CTCGAGGACC TGATCGCCGG CTGA
 
Protein sequence
MTPSTTISPP LADYDAVPGD DLLAEPVRVA VAILMGRGES REPYEWLARR LALDGYAAAV 
VPAGGNVAHA VGEVRRPGLP FVLLGSDSGA LAALAMAGSP AVRPDGLVLL GLPLLHVPVA
GIPVGDPPPR VLPDLPILLI HGRDDPISPL QLVRMTTRTA ARTELTVVPG GHAVLAGPGR
RSVPARVLLF LEDLIAG